Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1019 |
Symbol | |
ID | 5137898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1059387 |
End bp | 1059989 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640532477 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001216965 |
Protein GI | 147674524 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGTAA AAAGTGAAGA AAAAAGGCAA GCAATTCTAG AGATTGCTAA AGATTCCTTT ACAAAACAAG GTTTTGAACA GACTTCCATG TCGCATATTG CGAAGATGCT AGGGGGCTCG AAGGCCACGT TATACAACTA TTTCAGCTCG AAAGAAGAGA TTTTCACGGC GGTTATGGAG TCATCAGCGA CAGAGCAAAT CGCCCTCTCT TTCCTCTCAC TTGACCATAA TCGAGAGTTA AAACCCGCCT TATTAGAATT TGGTTACAAT TTTTTGAACT CGGTTTTAAC GCAAGATGCG ATGTCCATCT ATCGAATGGC GATTCATGAA GCCGACCGAT CTGCAATCGG CAGACATTTT TATGAAAATG GCCCGAAACG AGGTTGGGCT CGTTTAAGTC GCTACATTAC GTGCCAAATT GAATGTGGTT CACTGAAAGA GTGTGATCCT TGGATCGCCG CCATGCATTT CAAAGCGTTG CTATCTGCAC AATATTTTGA GCCCTTTTCA TTAGGTGCGA TTGAAAAACC GACCTCAAGT GAACTTAAAG CTACGACCCA ACGCGCGGTA GAGGCCTTTT TATGCCTGTA CGCAGCTGAT TGA
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Protein sequence | MRVKSEEKRQ AILEIAKDSF TKQGFEQTSM SHIAKMLGGS KATLYNYFSS KEEIFTAVME SSATEQIALS FLSLDHNREL KPALLEFGYN FLNSVLTQDA MSIYRMAIHE ADRSAIGRHF YENGPKRGWA RLSRYITCQI ECGSLKECDP WIAAMHFKAL LSAQYFEPFS LGAIEKPTSS ELKATTQRAV EAFLCLYAAD
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