Gene VC0395_A1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1019 
Symbol 
ID5137898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1059387 
End bp1059989 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content44% 
IMG OID640532477 
ProductTetR family transcriptional regulator 
Protein accessionYP_001216965 
Protein GI147674524 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTAA AAAGTGAAGA AAAAAGGCAA GCAATTCTAG AGATTGCTAA AGATTCCTTT 
ACAAAACAAG GTTTTGAACA GACTTCCATG TCGCATATTG CGAAGATGCT AGGGGGCTCG
AAGGCCACGT TATACAACTA TTTCAGCTCG AAAGAAGAGA TTTTCACGGC GGTTATGGAG
TCATCAGCGA CAGAGCAAAT CGCCCTCTCT TTCCTCTCAC TTGACCATAA TCGAGAGTTA
AAACCCGCCT TATTAGAATT TGGTTACAAT TTTTTGAACT CGGTTTTAAC GCAAGATGCG
ATGTCCATCT ATCGAATGGC GATTCATGAA GCCGACCGAT CTGCAATCGG CAGACATTTT
TATGAAAATG GCCCGAAACG AGGTTGGGCT CGTTTAAGTC GCTACATTAC GTGCCAAATT
GAATGTGGTT CACTGAAAGA GTGTGATCCT TGGATCGCCG CCATGCATTT CAAAGCGTTG
CTATCTGCAC AATATTTTGA GCCCTTTTCA TTAGGTGCGA TTGAAAAACC GACCTCAAGT
GAACTTAAAG CTACGACCCA ACGCGCGGTA GAGGCCTTTT TATGCCTGTA CGCAGCTGAT
TGA
 
Protein sequence
MRVKSEEKRQ AILEIAKDSF TKQGFEQTSM SHIAKMLGGS KATLYNYFSS KEEIFTAVME 
SSATEQIALS FLSLDHNREL KPALLEFGYN FLNSVLTQDA MSIYRMAIHE ADRSAIGRHF
YENGPKRGWA RLSRYITCQI ECGSLKECDP WIAAMHFKAL LSAQYFEPFS LGAIEKPTSS
ELKATTQRAV EAFLCLYAAD