Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0978 |
Symbol | |
ID | 5137272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1013212 |
End bp | 1013949 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532436 |
Product | hypothetical protein |
Protein accession | YP_001216924 |
Protein GI | 147675014 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCTCGA TCGCTATCTC CATTATGGTC TGCCACCTGC AACTGTTTAT CCATGTTAGG TCGTTCATCT TGTACCGAAT AAATGAAATG TTTGAGACTA TCCAAGGCGA AGGCGTGTTT ACTGGTGTTC CCGCGGTCTT TGTGCGCTTG CAAGGCTGCC CAGTCGGTTG TGCTTGGTGT GATACTAAGC AGACTTGGGA AACATTAGAC TCAGACCAAA CCTCATTCTC ACAAATTTTG CTGAAAACCA ATGATGCGCC AACTTGGTGT CAGGCCACTG CGCAAGAGGT GGTTCAACGC TACCAAGCGC AAGGTTATCA GGCAAAACAT ATCGTCATTA CGGGCGGTGA GCCCTGCATT TACGATTTGA CCGAGTTAAC TCAAGCGTTT GAAGCAATGG GTTGCCGATG CCAAATTGAA ACCAGTGGTA CTTACGAAGT CTGTGCGACC GAGAACACTT GGGTGACAGT GTCACCCAAG GTCGCGATGA AAGGGAAGTT ACCGATTCTG GATTCAGCCT TGCAACGTGC CAACGAAATT AAACATCCCG TGGCGACCGA GAAAGATATC GACAATCTTG ATGAGTTGCT TGCACGAGCT CAGGTCAGTG CTCAAACCGC AATCGCTTTG CAGCCGATTA GCCAAAAGCC GCGTGCGACA GAGTTGTGCA TTCGCACCTG TATTGCTCGC AATTGGCGTT TATCTATCCA AACCCATAAA TATCTCAACA TTGCTTAA
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Protein sequence | MTSIAISIMV CHLQLFIHVR SFILYRINEM FETIQGEGVF TGVPAVFVRL QGCPVGCAWC DTKQTWETLD SDQTSFSQIL LKTNDAPTWC QATAQEVVQR YQAQGYQAKH IVITGGEPCI YDLTELTQAF EAMGCRCQIE TSGTYEVCAT ENTWVTVSPK VAMKGKLPIL DSALQRANEI KHPVATEKDI DNLDELLARA QVSAQTAIAL QPISQKPRAT ELCIRTCIAR NWRLSIQTHK YLNIA
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