| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0975 |
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| Symbol | |
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| ID | 5136611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1009628 |
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| End bp | 1010656 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532433 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_001216921 |
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| Protein GI | 147674492 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0561977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATA AACTCACTGT TCTTGCTTCT GTCGTCGCAG CCTCGTCTGC CATGCTGAGC
CTCTCGGCAT CAGCCGCAGA AAGCACTCTA GACAAAGTGT TATCTCAAGG TTTTATTACT
TGTGGCGTCA GTACAGGCTT ACCGGGTTTT TCTAACCCAA ATGCAAAAGG GGAATGGGAA
GGGATCGACG TTGAATATTG CCAAGCAATG GCAGCAGCGG TTCTAGGCGA TAAAACCAAA
GTTAAATTTG TACCACTCAC CGCAAAAGAG CGTTTCACTG CGCTGCAATC CGGTGAAATT
GATGTTCTGT CTCGTAACAC AACATGGACT CTGCAACGTG ATAGCGCCCT GGGTCTTAAC
TTTGTCGGGG TGAACTACTA CGACGGCCAA GGTTTCATGG TGAAAAAAGA TTTGGGTGTG
AAAAGCGCCA AAGAACTGAA TGGCGCGTCA GTCTGTGTTC AATCGGGCAC CACAACAGAA
CTCAACTTGG CAGACTACTT CCGCAATAGC GGTATGACTT ACAAACCTGT GGTATTTGAT
ACTGCAGCTC AAACTTCAAA AGGCTTTGAT GCTGGTCGTT GTGATGTTCT GACGACTGAC
CAATCAGGTC TGTATGCACT GCGCCTCAAT TTAGAAAAAC CAGACTCTGC GGTCGTTCTA
CCTGAAATCA TCTCTAAAGA GCCTCTAGGT CCTGTGGTTC GTCAGGATGA TGATAAGTGG
TTCAACGTCG CTAAATGGGT ACTGTACGCC ATGGTCAATG CTGAAGAGTA CGGTATCACA
TCGAAAAACG TCGATGAGAT GATGAAGTCA GACAACCCAG AAGTAAAACG TATCCTTGGT
CTTGATGGTC CGAAAGGAAC GGGTCTTGGC ATTCGTGATG ACTGTAGCTA CCAAATTGTT
AAGCAAGTGG GTAACTACGG CGAAAGCTTC GATCGCACGG TCGGCTCTGG CTCACCACTA
AAAATTGACC GCGGTGTGAA TGCACTCTGG AATGCGGGCG GCTTTATGTA CGCACCACCT
ATCCGTTAA
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| Protein sequence | MANKLTVLAS VVAASSAMLS LSASAAESTL DKVLSQGFIT CGVSTGLPGF SNPNAKGEWE
GIDVEYCQAM AAAVLGDKTK VKFVPLTAKE RFTALQSGEI DVLSRNTTWT LQRDSALGLN
FVGVNYYDGQ GFMVKKDLGV KSAKELNGAS VCVQSGTTTE LNLADYFRNS GMTYKPVVFD
TAAQTSKGFD AGRCDVLTTD QSGLYALRLN LEKPDSAVVL PEIISKEPLG PVVRQDDDKW
FNVAKWVLYA MVNAEEYGIT SKNVDEMMKS DNPEVKRILG LDGPKGTGLG IRDDCSYQIV
KQVGNYGESF DRTVGSGSPL KIDRGVNALW NAGGFMYAPP IR
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