| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0972 |
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| Symbol | |
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| ID | 5135865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1006419 |
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| End bp | 1007174 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532430 |
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| Product | amino acid ABC transporter, ATP-binding protein |
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| Protein accession | YP_001216918 |
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| Protein GI | 147674878 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000308614 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAC AACTCAATCA AGATTTTATG ATTCAGATTA AAGACATGAA TAAATGGTAT
GGTGAATTTC ACGTCCTGAA GAACATCAAC CTGAATGTCA AAAAAGGCGA ACGTATCGTC
ATTTGTGGAC CATCCGGCTC AGGAAAATCA ACCATGATCC GCTGCATTAA CCGCCTTGAA
GAGCATCAAA AAGGGCAAAT CATCGTAGCG GGGAATGAGC TCACTGAAGA TTTGAAAAAC
ATCGAGCTAG TACGCCGTGA AGTTGGCATG TGTTTCCAAC ACTTCAACCT CTTCCCTCAT
CTGACGGTAT TGGAAAATTG CACGCTCGCA CCGATTTGGG TTAAGAAAAT GCCTAAAGAT
AAGGCGGAAG AAATTGCCAT GAAATATCTC ACTCGGGTGC GCATTCCAGA GCAAGCGGAT
AAATATCCCG GTCAACTCTC CGGTGGTCAA CAGCAACGCG TAGCCATTGC TCGCTCACTC
TGTATGAATC CACAAATTAT GTTATTTGAT GAGCCAACCT CTGCCTTAGA CCCCGAAATG
GTGCGTGAAG TGCTGGATGT TATGGTTGAA CTTGCCGAGG AAGGCATGAC CATGTTGTGT
GTGACCCACG AAATGGGCTT TGCGAAAGAA GTCGCAGACC GCGTTATTTT CATGGATGCC
GGAGAAATCA TTGAGGAAAA CAATCCAAAA GAATTCTTTG AAAACCCGCA ATCGGATCGT
ACACAGAACT TCCTTGCTCA GATCCTGCAT CACTAA
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| Protein sequence | MTQQLNQDFM IQIKDMNKWY GEFHVLKNIN LNVKKGERIV ICGPSGSGKS TMIRCINRLE
EHQKGQIIVA GNELTEDLKN IELVRREVGM CFQHFNLFPH LTVLENCTLA PIWVKKMPKD
KAEEIAMKYL TRVRIPEQAD KYPGQLSGGQ QQRVAIARSL CMNPQIMLFD EPTSALDPEM
VREVLDVMVE LAEEGMTMLC VTHEMGFAKE VADRVIFMDA GEIIEENNPK EFFENPQSDR
TQNFLAQILH H
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