| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0958 |
|---|
| Symbol | |
|---|
| ID | 5137904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 986938 |
|---|
| End bp | 988335 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640532416 |
|---|
| Product | MutT/nudix family protein |
|---|
| Protein accession | YP_001216904 |
|---|
| Protein GI | 147673762 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTTT CTTTTTCGGC GTTATCTAGC CAAGAAGAAG AGGCAGCTTA TCGCGGCGCT
TTATGTCTGA TCCGTGGTGA TCATAAATTA GTGATGACCC AAGAAGTGCT CACCGGAAAA
CTCTCCTTGC CCGGCGGTAC GATTGAAGCG GGTGAAACAC CCCAAATGGC GGCTCAGCGT
GAAACATGGC AAGAGACTGG CATGGTGGTT TCTGTTGGAC GCCTGATTGG CCAGACATCG
ACCGCGGTAG TCTATGAATG CGTCAGTGAA TCTCAGGTGA TCGCTTACTC TTACCAAAAT
GGTTTTGGAG GGTATGAACT GCCGATCTGG TTTGCGCCGG ATTATGGGGT AGAAACCGTT
TCTGCCATGT TGGTTAATCC AAGTTTCATC AAGGCTGAGC AGTATCGTTA TCCAGAACAG
TGGTCTTTTA TTGCCGATTT ATTCAAAGTA AGCCAAGAGC AAGCGGTAGA TTATGTGGCA
GAGCTCCATA AAGCGGCTCC TCAATTTCAG CAGGTGGAAT TAGAGTGGTT GGGGCAATTA
CAACATGGTG TCGCCCAACT AAAAAAGAGT ATGCCTTGGT TACAAAACCT GATCTTAAGC
GGGATGATTT TTAATCTTCC CGTGGTCGCT TTGGTTCTGT TTCCTTTGCT CTATTGGCAG
CTTGGCAAAC CTTATTGTTA CAAGATTCTG TTTGCTATGT CGGTCACATC CTTGCTGTGC
CTCGTCGCTC AGCAGGGGTT CGCGTTACCA AGACCACATG TTTACCAACC TGCATTAGAG
CTGTTTCCAA GCTACGGCTT TGCCTTCCCG AATTTGCCTA TCGCGCTTTG GAGCTGCTTA
GGTGTGCTGC TGTGGCATGT GCAACAAGAG TTCACTCAGC GTTGGGTGAT GCGTGTGTGG
GTCGGTCTGT TTGCTTGGCT CTCATTTGCT TCTTTTTATT CGGGTAGTGC TTTTCTCAGT
GATCTTGCCA CTGGTGCCTT AGTGGGAGCC TTAGTCGCTT GGCACATTAT TCGCCTCGAT
TTAAAACCGG GTGTGAATGT CGAGAGCCTA CTTTGCTCTA AGTCGGTTTG GTGGGGATTG
ACCGTCGCTT GCGTGATCCT TGCTATCATC TGGCCGCAAC CCATTTTTAC GCAATGGCTT
GCGTTATTGG TGACGATCTC TGGTCTAGTG ACCCTCTTAA CACCAAGCTC TTCAACGCTT
TCATTGCGTG GGGTGTTGCT GATGATCGCG CTGTTACTGT TAGCCGATCA GGGAATCTCC
TTGTTGATTG AGCCCTTCAA TCACAGTTCA TTCTATATGT TAGTGGGTGA AACTCTGCGC
TATCCCGTGC TGATTTTACT GTTTGTGTTA CTGGCTCGCC GCGGCTTAAA AGCTCCGATA
GTAAGTTCCA CATATTAA
|
|---|
| Protein sequence | MGLSFSALSS QEEEAAYRGA LCLIRGDHKL VMTQEVLTGK LSLPGGTIEA GETPQMAAQR
ETWQETGMVV SVGRLIGQTS TAVVYECVSE SQVIAYSYQN GFGGYELPIW FAPDYGVETV
SAMLVNPSFI KAEQYRYPEQ WSFIADLFKV SQEQAVDYVA ELHKAAPQFQ QVELEWLGQL
QHGVAQLKKS MPWLQNLILS GMIFNLPVVA LVLFPLLYWQ LGKPYCYKIL FAMSVTSLLC
LVAQQGFALP RPHVYQPALE LFPSYGFAFP NLPIALWSCL GVLLWHVQQE FTQRWVMRVW
VGLFAWLSFA SFYSGSAFLS DLATGALVGA LVAWHIIRLD LKPGVNVESL LCSKSVWWGL
TVACVILAII WPQPIFTQWL ALLVTISGLV TLLTPSSSTL SLRGVLLMIA LLLLADQGIS
LLIEPFNHSS FYMLVGETLR YPVLILLFVL LARRGLKAPI VSSTY
|
|---|
| |