| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0936 |
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| Symbol | ompV |
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| ID | 5135941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 959792 |
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| End bp | 960565 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532394 |
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| Product | outer membrane protein OmpV |
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| Protein accession | YP_001216882 |
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| Protein GI | 147673427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3713] Outer membrane protein V |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0240452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA TCGCACTATT TATCACAGCA TCACTTATCG CAGGCAACGC TCTAGCTGCC
CAAACTTACA TTCGTAACGG CAATATCTAT ACCCACGAAG GTCAATGGGC TGCGGAAGTG
GGTGCTTTTG GCAGTACTGA CCTACTCAAG GATCAAGACA AATCTTACGG TGCTTTACTG
AACTTTGGTT ACCACGGTGA AGATTTCAAC GCTGATCTTT CAGGCCTCAA CTACCGCTTC
TTTGGCAACA CAGGCGATAT CGTGAATCTA GGCACTTATC TGACTGGCAG CGGCGTTGCT
TATGACCAAG ATTCAGCAAA CAGTGTCAAA GGCATGGACA AGCGCAAAGC CACGGTTGAC
CTAGGTTTAA ACGCCGATAT CGCGCTGGGT GACGGTACGG TATCAACCTA CTTCCAACAC
GATATTCTTA ATGAGAACAA AGGCTACAAA ACGGGCGTTA ACTACTTCCA TATCATCGAT
TTGGGTGTCG CTGACTTAGT ACCTTTTGCT GGTATCAGTT ACCAGAGTTC GGATTACAAC
AACTACTATT TCGGTGTAAA AGACAAAGAA GCAACCGCGC AGCGTAAAGC CTACCATGCG
GGTGGCGACT TCTCTTACAA CCTAGGTTAC AAATTGGTTT ACCCAATTAA TGACCGTTGG
GAAATCACCC AAACCAGTGC TTACACTCGT TTAGGCTCTG ATATCGCTCA TTCACCCATC
GTCGACAGCG CAAACCAGTG GCTCGTTGGT GCAACCGTCG CTTACCACTT CTAG
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| Protein sequence | MKKIALFITA SLIAGNALAA QTYIRNGNIY THEGQWAAEV GAFGSTDLLK DQDKSYGALL
NFGYHGEDFN ADLSGLNYRF FGNTGDIVNL GTYLTGSGVA YDQDSANSVK GMDKRKATVD
LGLNADIALG DGTVSTYFQH DILNENKGYK TGVNYFHIID LGVADLVPFA GISYQSSDYN
NYYFGVKDKE ATAQRKAYHA GGDFSYNLGY KLVYPINDRW EITQTSAYTR LGSDIAHSPI
VDSANQWLVG ATVAYHF
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