| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0916 |
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| Symbol | |
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| ID | 5136507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 935994 |
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| End bp | 937625 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532374 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001216862 |
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| Protein GI | 147673794 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000029497 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAT CCATTCTTAG TAAATTGCTG CTGACATTAA TCACCGTGTT TGCCTTAGTT
TTGGCGGGCT CAACGTCTTA TCAATATTGG CAGCAAAAAG ATCTCATTCA TTCCGTGTTA
AGTGAGCAGC TGCACGACAA AGCCAGTAAC TACTTTGATA GCCTGAACAT GATGATGCTG
ACTGGCACCA TGGCACAAAA AGAGACGCTA CGCCAAAAAG CATTAGCACA AGATGGCATT
GAACAAGTTC GCGTCATTCG AGCGCCTTCT TTAAACAAGA TTTATGGCCC CGGAAGCACG
GATCAACAAC CGAAAGATGA AATTGATCAA CGGGCATTAC AAGGCGAAAC CATTATAGAG
CCCTATCAAG CCGATTGGGG GAAAGGCATT GTGGTTGCCT TGCCGATGAA GTCGAGTGAA
AACTATCGTG GTACTAACTG TGTGGCTTGT CACATCGCAC CAGAAGGTGA AGTGCTTGGT
GTAATTCGTC TTGAGTTTAA TCTTAACCAC TTAACGCAAA TGGTGAATCA TCGCACTCTT
ATTGGTGTCG GCATTATGTC GGTTATTGCG CTGTTTGGTT TTATGTTGAC GCTGTTTTTC
ATGCGTAGAA TTATCGTTCT CCCTTTGCAA AAAACGTCGG CCTTTATGTG TGAAGTGAGT
AAGAGTAAAG ATCTTTCCCA TCGACTCGAA AACGATAGAA AAGATGAACT CGGGCAACTG
GCGGTATCCA TCAACTCACT GATGGATACG GTGTCAGACA GCTTGCAACA AGTGCAAGAC
ACTTCCCATT CCCTTGCTGA TTCGGCCAAA AAGCTTACGA ATGTCGCGCA AGTCACCGAT
CAGGCGGCCA ACAATCAACA AAAAGAAACT GCAGAAGTGC AAACCAACAT CACGGATATG
CAAGGTAAGC AGCAACAAGT GGAGTTTGCG ACCGAAGAAG CGTCTAAATT GGTCAATCAC
ACCACCAGTA TTGTTCAGCA AAGTGCCAAG CAAGCACACG CAGCCAGTGA AGATATCAAA
AATCTGGTGG GCGATATTGA GGCGGTCAAA CAACGGATTG TGGAATTAAA TAATCAAACT
GGCCAAGTAT CATCCATTCT TGGCGTGATC AAAGGCATTG CCGAACAAAC TAACTTACTT
GCGCTGAATG CCGCTATTGA GGCGGCGCGA GCGGGCGAAC AAGGTCGCGG TTTTGCTGTC
GTTGCAGATG AAGTGCGTCA TCTTGCATCA CGCACCACTG AAGCAACCGG AAATATTGAA
AACATCATCG CAGGATTTCA GCGTGACAGC CAAGCCTCGC TCTCTTCGGT AGATACCGTC
TGCTCTCATG CGCATCAGCG TTCATCCGAA GTGGAAGAGC TCTCAGCGGC CATGACTCGT
GTGGTCAGCG AAATGCAACA AGTGCTAAGC CATGCTATGG GCATTCAAGA GCAGACCAAA
CGCACCACGG AAGTCAGTCA TGAGATCCAA AATAAGGTTG ATGTCATCAC TCATCACGCG
AACAACACAT CACAATCGGC AAGTGAGACG CGTGAGATCA GCATCGATCT TGAACATTTG
TCACAACAAT TGGAGTCCTT GCTGAATCAA TTTACTTTGA TTGCTAAGAA TTCTGCGCGG
AAACCACATT AA
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| Protein sequence | MNSSILSKLL LTLITVFALV LAGSTSYQYW QQKDLIHSVL SEQLHDKASN YFDSLNMMML
TGTMAQKETL RQKALAQDGI EQVRVIRAPS LNKIYGPGST DQQPKDEIDQ RALQGETIIE
PYQADWGKGI VVALPMKSSE NYRGTNCVAC HIAPEGEVLG VIRLEFNLNH LTQMVNHRTL
IGVGIMSVIA LFGFMLTLFF MRRIIVLPLQ KTSAFMCEVS KSKDLSHRLE NDRKDELGQL
AVSINSLMDT VSDSLQQVQD TSHSLADSAK KLTNVAQVTD QAANNQQKET AEVQTNITDM
QGKQQQVEFA TEEASKLVNH TTSIVQQSAK QAHAASEDIK NLVGDIEAVK QRIVELNNQT
GQVSSILGVI KGIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRHLAS RTTEATGNIE
NIIAGFQRDS QASLSSVDTV CSHAHQRSSE VEELSAAMTR VVSEMQQVLS HAMGIQEQTK
RTTEVSHEIQ NKVDVITHHA NNTSQSASET REISIDLEHL SQQLESLLNQ FTLIAKNSAR
KPH
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