| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0915 |
|---|
| Symbol | asnC |
|---|
| ID | 5137551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 934447 |
|---|
| End bp | 935892 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640532373 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_001216861 |
|---|
| Protein GI | 147673141 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00479655 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGG GATGTCTTTA TATCTCAACG GAGACTGTAA TAAACATGAC TTACGCGCCT
GTAAATGACG TACTCAGCGG CAAGCTCGCA GTAGACAGTG AAGTCACTGT TCGCGGCTGG
ATTCGCACAC GTCGTGATTC CAAAGCTGGA ATTTCGTTTC TTGCCATCTA TGACGGCTCT
TGTTTCAACC CGATTCAGGC CGTGGTTCCT AATAATCTCA ATAATTACGA CAACGAAGTT
CTGAAGCTCA CTACAGGCTG TTCCGTTGAA GTAACCGGTA AGATTGTTGA ATCTCCAGCT
TCAGGCCAAG CATTTGAACT GGCTGCGTCT GACGTAAAAG TCGTCGGTTG GGTTGAAGAT
GCTGACACTT ACCCAATGGC GAAAACGCGT CATTCGATTG AATATCTGCG TGAAGTGGCT
CACCTGCGTC CACGTACTAA CGTGATCGGT GCGGTTGCGC GTGTTCGTAA CTGCTTGGCA
CAAGCGATTC ACCGTTTCTA CCATGAACAA GGTTACTTCT GGGTTTCAGC GCCTCTTATC
ACCGCTTCTG ATGCAGAAGG CGCAGGTGAA ATGTTCCGCG TTTCAACGCT GGATATGGAA
AACCTACCGC GTACTGATGC AGGTAAAGTG GATTACAACC AAGACTTCTT TGGTAAAGAA
ACCTTCCTGA CCGTATCAGG CCAGCTCAAC GCGGAAGCTT ACGCTTGTGC GATCAGCAAA
GTGTACACTT TCGGTCCAAC ATTCCGTGCG GAAAACTCAA ACACCAGCCG TCACTTGGCG
GAATTCTGGA TGGTTGAACC TGAAGTTGCA TTCGCTGACC TGAACACTGT AGCAAAACTG
GCTGAAGACA TGCTGAAGTA CGTGTTCAAA GCCGTACTGG CAGAGCGTCG TGACGATCTT
GAGTTCTTTA ACGATCGTAT TAATAACGAA GTGATTGCGC GTCTTGAGCA ATTTGTTGAA
TCTGATTTCG CACAAGTGGA TTACACTGAT GCGATTGAAA TTCTGAAAAA CTGCGGCAAA
ACGTTTGAAT TCCCTGTTGA ATGGGGCATT GATTTGGCTT CTGAGCACGA GCGTTTCCTT
GCAGAAGAGC ACTTCAAAGC ACCGGTTATC GTGAAGAACT ATCCAAAAGA CATCAAAGCG
TTTTACATGC GTATGAACGA AGATGGCAAA ACCGTTGCGG CGATGGACGT CTTGGCACCG
GGCATTGGTG AAATAATCGG CGGTTCACAG CGTGAAGAGC GTTTGGATAT TCTTGATGCG
CGTATGCGTG AATTTGGCAT CGATCCTGAG CACATGGACT GGTATCGCGA CCTGCGCCGT
TACGGCACAG TGCCGCACGC GGGCTTTGGT CTGGGCTTCG AGCGTCTCGT GTCTTACGTA
ACTGGTATGG GTAACGTACG TGACGTTATT CCGTTCCCAC GTACTCCACG TAGCGCGAGT
TTCTAA
|
|---|
| Protein sequence | MALGCLYIST ETVINMTYAP VNDVLSGKLA VDSEVTVRGW IRTRRDSKAG ISFLAIYDGS
CFNPIQAVVP NNLNNYDNEV LKLTTGCSVE VTGKIVESPA SGQAFELAAS DVKVVGWVED
ADTYPMAKTR HSIEYLREVA HLRPRTNVIG AVARVRNCLA QAIHRFYHEQ GYFWVSAPLI
TASDAEGAGE MFRVSTLDME NLPRTDAGKV DYNQDFFGKE TFLTVSGQLN AEAYACAISK
VYTFGPTFRA ENSNTSRHLA EFWMVEPEVA FADLNTVAKL AEDMLKYVFK AVLAERRDDL
EFFNDRINNE VIARLEQFVE SDFAQVDYTD AIEILKNCGK TFEFPVEWGI DLASEHERFL
AEEHFKAPVI VKNYPKDIKA FYMRMNEDGK TVAAMDVLAP GIGEIIGGSQ REERLDILDA
RMREFGIDPE HMDWYRDLRR YGTVPHAGFG LGFERLVSYV TGMGNVRDVI PFPRTPRSAS
F
|
|---|
| |