| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0911 |
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| Symbol | aspC |
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| ID | 5137862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 929993 |
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| End bp | 931228 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532369 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_001216857 |
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| Protein GI | 147675573 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGAGTT CAATCATCCC TTCCCACCCT AACTTGACAT GGATGTGCTT TATGTTCGAA
AAAGTCGTTG CCGCTCCCGC TGACCCTATC CTAGGTTTAA CTGAAGAGTT CAAAAAAGAC
CCTCGTACCG ACAAAATTAA CCTCGGTGTA GGTATTTATA AGAATGAAGC AGGTGAAACC
CCGGTTCTCG CTACTGTAAA GAAAGCAGAA GCCGCACTGC TTGAGTCAGA GAAAACCAAA
TCTTATCTCA CGATCGAAGG GACAGCTGAG TACGGTTTAG CAGTACAAAA ACTGCTGTTC
GGCGCGAATT CGGACATAGT GACACAAAAA CTGGCAAAAA CAGCGCAAGC CCCTGGTGGC
ACTGGTGCGC TGCGTGTGGC GGGTGAATTT ATTAAGCGTC AACTGGGCGA TGTGAAAGTC
TGGATCAGTA ACCCAACTTG GGCTAACCAT CACGGTGTGT TCAATGCCGC TGGCTTGGAA
ACTACGCAAT ACGCTTATTA TGATGCCAAA GACAAAGATT TTGCCGCTAT GCTGGCAGAT
TTAGAGCAGG CAGAGAAAGG CGATGTGGTT TTACTGCATG GCTGCTGCCA CAATCCAACG
GGTATTGACC CAACAGAGCA AGAGTGGGAA GTACTGGCGA AATTGGTGGC TGACAAAGGC
TTACTGCCTC TGTTTGACTT TGCTTACCAA GGCTTTGCTT CAGGTGTGGA AGAAGACGCG
GCTGGCCTAC GTATTTTTGC GAAATACAAC TCTGAGATTC TGGTTGCCAG CTCTTTCTCA
AAGAACTTTG GCTTGTACAA CGAACGTGTC GGTGCCTTCA CGCTGGTTGC ACCTTCAACA
ACCGTTGCAG AAACGGCGTT CTCACAAGTT AAAGCGATTA TCCGCTCTAT CTACTCAAAC
CCACCAGCTC ACGGTGCTGC CGTTGTCACT TATATTCTGA ACAACCCAGA ATTACGCGCA
GAATGGGAAG CCGAAGTCGC GGAAATGCGT GAACGTATTC AAGAGATGCG CGTACTTTTC
GTTAACACAT TGAAAGAAGT GGGTGTAGAC GCTGACTTTA GCTTTATCGA GCGTCAAAAC
GGCATGTTCT CTTTCTCTGG CCTAAGCAAA GAGCAAGTTG CACGCCTCAA ATCAGAGTTG
GGTATCTATA TCGTCGGCTC TGGCCGCATC AGCGTAGCGG GGATGACCAA ATCAAACATG
CTACCCTTGT GCCAAGGCAT TGCTGCGGTG ATGTAA
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| Protein sequence | MMSSIIPSHP NLTWMCFMFE KVVAAPADPI LGLTEEFKKD PRTDKINLGV GIYKNEAGET
PVLATVKKAE AALLESEKTK SYLTIEGTAE YGLAVQKLLF GANSDIVTQK LAKTAQAPGG
TGALRVAGEF IKRQLGDVKV WISNPTWANH HGVFNAAGLE TTQYAYYDAK DKDFAAMLAD
LEQAEKGDVV LLHGCCHNPT GIDPTEQEWE VLAKLVADKG LLPLFDFAYQ GFASGVEEDA
AGLRIFAKYN SEILVASSFS KNFGLYNERV GAFTLVAPST TVAETAFSQV KAIIRSIYSN
PPAHGAAVVT YILNNPELRA EWEAEVAEMR ERIQEMRVLF VNTLKEVGVD ADFSFIERQN
GMFSFSGLSK EQVARLKSEL GIYIVGSGRI SVAGMTKSNM LPLCQGIAAV M
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