Gene VC0395_A0890 details

Gene Information

• Locus tag: VC0395_A0890
• ID: 5137454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 903836
• End bp: 904492
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640532347
• Product: glyoxylase II family protein
• Protein accession: YP_001216835
• Protein GI: 147675111
• COG category: [R] General function prediction only
• COG ID: [COG0491] Zn-dependent hydrolases, including glyoxylases

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000000389063
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTAC AATATCAGGT GGTGCCTGTT ACGGCCTTTG CTCAGAACTG CTCTATCGTG 
TGGTGTGATG AAACCATGGA AGGCATAGTG GTGGATCCGG GTGGTGATGT GAAACAGCTC 
GCGATTTTGA TCGCGGAGCT AGGCGTAAAA GTAACCCAAC TGGTACTGAC TCATGGTCAC 
CTTGATCACG TTGGTGGTAC GCAGTCACTG GCGCAAGCTC TCGGTGGAAC TCGGGTTGTC 
GGGCCGCACA AAGCGGATAA TTTCTGGCTA CAAGGGCTCG AAGGGCAAAG CAAAATGTTT 
GGCTTTCCGC TTACTGAAGC CTTTGAACCT GATGAGTGGC TCGATGATGG TGATGTGATC 
CACTTTGGTC AGCAAACTCT GCAAGTTATC CATACTCCCG GACATACACC AGGTCATGTT 
GTGCTGTTTA GTGAAGCGGC ACGTTTGGCG TTTGTGGGTG ATGTGCTGTT TAACGGCAGT 
ATTGGCCGTA CGGATTTCCC GCAAGGGGAT TTCAATACTC TGATTGCGTC TATCAAAAAT 
AAACTCTGGC CGCTTGGCAG CGATGTCACC TTCATCCCCG GTCATGGCCC CCAATCTACC 
TTTGGCCGTG AACGTGCCAG CAACCCATTT GTCGCGGACG AAATGCCGCT CTACTGA 

 

Protein sequence

MSLQYQVVPV TAFAQNCSIV WCDETMEGIV VDPGGDVKQL AILIAELGVK VTQLVLTHGH 
LDHVGGTQSL AQALGGTRVV GPHKADNFWL QGLEGQSKMF GFPLTEAFEP DEWLDDGDVI 
HFGQQTLQVI HTPGHTPGHV VLFSEAARLA FVGDVLFNGS IGRTDFPQGD FNTLIASIKN 
KLWPLGSDVT FIPGHGPQST FGRERASNPF VADEMPLY