| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0863 |
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| Symbol | astE |
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| ID | 5135854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 873288 |
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| End bp | 874316 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532321 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_001216809 |
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| Protein GI | 147673220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGT CTCTCTTCCG CCAATCTTTT CTTTTCGACA GCTTAGATCT TGACCATCCC
ATGGTCGCGC AAACCGTACG TACAGAGCAG GGTGTGACCT TAAAGCTGCA TCAACGTGGC
GTGTTGGAAG TGATCCCAGC TCAAACGGAC GCGGCGACAA AAAATATGGT GATCTCCTGT
GGGGTACATG GTGATGAAAC CGCACCTATG GAACTGCTGG ATAAATGGAT TGACGATATC
GTCAGCGGAT TTCAACCCGT TGCTGAGCGC TGCTTATTTA TTCTGGCGCA CCCGCAAGCC
ACGGTGCGCC ATGTCCGTTT TATTGAGCAG AATCTCAACC GCTTATTTGA TGATAAGCCC
CACACTCCGA GCACTGAGCT GGCGATTGCC GATAACCTCA AAGTTCTGCT TAAACAGTTT
TTTGCTAACA CGGACGAGCA CTCGCGTTGG CACCTAGATT TGCACTGTGC CATTCGTGGC
TCGAAACACT ATTCGTTTGC AGTAAGCCCG AAAGCGCGTC ATCCGGTGCG CAGCCGTAGC
CTGATGCAAT TTATCGAGCA AGCCCATATT GAAGCCGTGA TGCTATCGAA TGCGCCTTCC
AGTACGTTTA GTTGGTATTC AGCCGAGCAT TATGCTGCGC AAGCCTTAAC CTTAGAGCTT
GGTCAAGTGG CACGCTTAGG TGAAAATCTA TTAGACCGTC TGCTGGCCTT TGATCTGGCG
ATGCGAGATC TCATCTCTCG CCATAAACCC GAGCACTTAC CGAGAAAATC GGTGATGTAC
CGAGTCAGTC GCACCATAGT GCGTCTGCAT GATGATTTTG ATTTTCGCTT CAGTGACGAC
GTGGAAAACT TCACCGCCTT TATGCATGGG GAAGTGTTTG GTCACGATGG TGATAAGCCT
TTAATGGCGA AAAATGAAGG GGAAGCGATT GTTTTCCCGA ACCGCAAAGT GGCCATTGGC
CAGCGTGCTG CCTTGATGGT GTGTAAGGTG AACACGCGCT ATGAAGATGA CCAATTGGTG
TACGACTGA
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| Protein sequence | MTKSLFRQSF LFDSLDLDHP MVAQTVRTEQ GVTLKLHQRG VLEVIPAQTD AATKNMVISC
GVHGDETAPM ELLDKWIDDI VSGFQPVAER CLFILAHPQA TVRHVRFIEQ NLNRLFDDKP
HTPSTELAIA DNLKVLLKQF FANTDEHSRW HLDLHCAIRG SKHYSFAVSP KARHPVRSRS
LMQFIEQAHI EAVMLSNAPS STFSWYSAEH YAAQALTLEL GQVARLGENL LDRLLAFDLA
MRDLISRHKP EHLPRKSVMY RVSRTIVRLH DDFDFRFSDD VENFTAFMHG EVFGHDGDKP
LMAKNEGEAI VFPNRKVAIG QRAALMVCKV NTRYEDDQLV YD
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