Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0834 |
Symbol | uvrC |
ID | 5135122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 849689 |
End bp | 851521 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640532292 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001216784 |
Protein GI | 147674383 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000370037 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGACAC AGTTTGATTC TGCCCCTTTT CTTAAGACAG TCACCAACCA GCCCGGCGTA TACCGAATGT ATAACGCTGA GGCTGAAGTG ATTTATGTCG GCAAAGCCAA AGACCTCAAA AAGCGTCTAA CCAGCTATTT TCGCAAGAAT CTCGACAGCG AAAAAACCAA AGCTCTCGTC AGCAACATCG CCAAGATTGA CGTGACGGTC ACCCACACCG AAACGGAAGC ATTGATCCTT GAGCACAATT ACATCAAGCA GTATCTGCCT AAGTACAACG TGCTGCTGCG TGATGATAAG TCTTATCCCT ATATTTTCTT AAGCGCGCAC AAACACCCGC GACTGTCCTC ACATCGTGGT GCCAAAAAAC GCCGTGGTGA ATATTTCGGG CCTTATCCGG ATTCGGGGGC AGTGCGTGAA ACTCTGCATT TGATCCAGAA AATCTTTCCC GTCCGTCAGT GTGAAGATAC GGTGTACAGC AACCGTACTC GACCTTGCTT GATGTATCAG ATTGGGCGCT GTGCCGGACC TTGTGTGAAA GGACTGATTT CTGACCAAGG CTATCAAGAG ATCGTCCATT ACCTACGTCT TTTCCTGCAA GGCAAAGACA ACCAAGTACT GTCGATTCTG GTTGAGAAAA TGGAGCAGGC GAGCCGTGAA CTGCGTTTTG AAGATGCCGC TAAAGCGCGT GACCAAATTC AAGCCATTCG CCGCGTACAA GAGCAGCAGT TTGTGTCGGA CGACAGTTTG GAAGACTTGG ATGTGCTCGG TTTTGCACAA GAAAATGGCA TTGCTTGCAT CCATATTTTG ATGATCCGCC AAGGCAAAGT GCTCGGCAGT CGTAGCCATT TTCCGAAAAT TCCAAGTGAC ACCTCGCAGG TCGAAGTGTT TGAGAGCTTT TTAAGCCAAT ATTATTTAAG TCACAGTGAA GCTCGCAGTA TTCCGGCACG GATCATTTTA AATCGAGGAT TGACCGAAGA AACCGAGGCG CTACAAATCG CGATCAGTGA ACTTGCAGGG CGCAAAGTCA CTTTCCATGT CAATCCTACC GGCACGCGAG GTCGTTATCT GAAACTCGCC AATACCAACG CGCTGACGGC GATCACGACT AAGATGAATC ACAAGATGAC CATCAGTCAG CGCTTCAAAG CCCTGCAAGA AGAGCTCGGA ATGGATGCGA TTACCCGCAT GGAGTGTTTT GATATCTCGC ATACCATGGG CGAAAGCACG ATGGCCTCTT GTGTGGTGTT TAACCAAGAA GGGCCGCTAA AGCAAGAGTA TCGGCGTTAC AACATCACGG GCATCACTGG TGGGGATGAT TACGCGGCGA TGGCGCAAGT GTTGGAGCGC CGTTACAGTA AGCAGCTTGA TAGCAGCAAA ATTCCCGACA TTATTTTTAT TGATGGTGGG AAAGGGCAGC TTAATCGTGC GTACGAAATT ATCTCCTCAT GTTGGCAGGA TTGGCCGAAG TACCCGAAGA TCATCGGCAT CGCCAAAGGG GTGACACGTA AACCTGGTTT AGAAACGCTG ATCACTATTG ATGGTGATGA GTTTCATCTG CCGAGTGATG CGCCTGCGTT GCACTTAATT CAACACATTC GGGATGAAAG CCATAACCAC GCGATTGCAG GACACCGCGC GCAGCGCGGA AAAACTCGCC GTACCAGTAC ACTTGAGGGT ATCGAAGGCG TCGGGCCGAA ACGGCGTCAA GCCTTGCTGA AATATCTGGG TGGTATGCAG GAGTTAAAAC GCGCTTCTGT TGAAGAAATC GCCAAAGTGC CGGGCATCAG CCACGCATTG GCAGAAAACA TTTATCAAGC ATTGAAACAA TAA
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Protein sequence | MSTQFDSAPF LKTVTNQPGV YRMYNAEAEV IYVGKAKDLK KRLTSYFRKN LDSEKTKALV SNIAKIDVTV THTETEALIL EHNYIKQYLP KYNVLLRDDK SYPYIFLSAH KHPRLSSHRG AKKRRGEYFG PYPDSGAVRE TLHLIQKIFP VRQCEDTVYS NRTRPCLMYQ IGRCAGPCVK GLISDQGYQE IVHYLRLFLQ GKDNQVLSIL VEKMEQASRE LRFEDAAKAR DQIQAIRRVQ EQQFVSDDSL EDLDVLGFAQ ENGIACIHIL MIRQGKVLGS RSHFPKIPSD TSQVEVFESF LSQYYLSHSE ARSIPARIIL NRGLTEETEA LQIAISELAG RKVTFHVNPT GTRGRYLKLA NTNALTAITT KMNHKMTISQ RFKALQEELG MDAITRMECF DISHTMGEST MASCVVFNQE GPLKQEYRRY NITGITGGDD YAAMAQVLER RYSKQLDSSK IPDIIFIDGG KGQLNRAYEI ISSCWQDWPK YPKIIGIAKG VTRKPGLETL ITIDGDEFHL PSDAPALHLI QHIRDESHNH AIAGHRAQRG KTRRTSTLEG IEGVGPKRRQ ALLKYLGGMQ ELKRASVEEI AKVPGISHAL AENIYQALKQ
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