| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0820 |
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| Symbol | |
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| ID | 5135919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 832601 |
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| End bp | 833812 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532278 |
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| Product | putative trypsin |
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| Protein accession | YP_001216770 |
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| Protein GI | 147673040 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5640] Secreted trypsin-like serine protease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000898339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATCAGG TTTCTAAATT GCTGTCGTGT TTTATCGGTT TTTCTCTTTT CTCTACACTG
CTCTATGCGG AATCCACAGC AGATATTTCA TCTCGTATTA TTAATGGTTC GAATGCAAAC
TCTGCCGAAT GGCCATCGAT TGTGGCTCTG GTTAAACGCG GTGCAGATGC TTATCAAGGG
CAATTTTGTG GCGGTAGTTT TTTAGGTGGA CGATATGTCT TAACCGCTGC TCACTGTTTT
GATAGTCGTA GTGCTGCTAG TGTGGATGTG ATTATTGGTG CTTATGATCT GAATAACTCT
TCTCAAGGAG AAAGGATTGC CGCGCAAAAA ATTTACCGTC ATTTGAGTTA TAGTCCCAGT
AACTTATTGA ATGACATTGC GATTGTCGAG TTAGCACAAA CCAGTAGTTT GCCTGCCATC
ACTTTAGCGG GTCCTGCAAC ACGCACGTCT TTACCAGCAT TAACCCCTTT AACAGTGGCT
GGATGGGGGA TTACCGTGCA ATCAAAACCG CCACAATTTA CTCCGATACT ACAAGAAGTG
GATGTTGACC TGGTTTCGCA ATCGCTTTGC CAAATAGTCA TGCAGCATGG AATTTCCTCT
GATCCTAATT CGACCAACTT TTGTGCCGCT CGTCTTACGA AAGATTCATG TCAGGGAGAT
TCTGGTGGCC CAATTGTAGT TAAAACGGGT CGAGAGCAGC TGGGTATTGT GAGTTGGGGG
GATGAACAAT GCGCTAAAAC AGGCACTTAT GGTGTGTATA CCAACGTCAG TTATTTTCGT
GATTGGATCA CAAAGCACAC TAACCAGCTT AGCTATGATC AAGTCGCCAA TCTCGGTATT
CGTCCATTAG GTAAAGTGAG TCAATCATTT ACATATACCA ACCTTGATGC TAATGCGCTG
ACCTATACAG GAAACACATT CTCAAGTCTG CCCGCTGATT TTAGTGTGCT ATCCGATGGG
TGCAGTACTA AAGTGACGTT AGCCACAGGT GAAAGTTGTA GTGTAGAAGT GGCTGTTGAT
GCGCAACACT ACCGTCAATA TCAGTATGAC TTTGAGTTGA TCTTTAGCTA TGCGGGAGGT
TCTAAACGTG CAACGTCTCG TATTCAACTG GATACTTCGC CTTTTGCCCC AAGTGCCTCT
TCTGGCGGTT CCATCGGCTG GTTTGGTTTG CTGCTTTTGG CTCCATTGTG GATGAGACGG
AAAACCGCTT GA
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| Protein sequence | MHQVSKLLSC FIGFSLFSTL LYAESTADIS SRIINGSNAN SAEWPSIVAL VKRGADAYQG
QFCGGSFLGG RYVLTAAHCF DSRSAASVDV IIGAYDLNNS SQGERIAAQK IYRHLSYSPS
NLLNDIAIVE LAQTSSLPAI TLAGPATRTS LPALTPLTVA GWGITVQSKP PQFTPILQEV
DVDLVSQSLC QIVMQHGISS DPNSTNFCAA RLTKDSCQGD SGGPIVVKTG REQLGIVSWG
DEQCAKTGTY GVYTNVSYFR DWITKHTNQL SYDQVANLGI RPLGKVSQSF TYTNLDANAL
TYTGNTFSSL PADFSVLSDG CSTKVTLATG ESCSVEVAVD AQHYRQYQYD FELIFSYAGG
SKRATSRIQL DTSPFAPSAS SGGSIGWFGL LLLAPLWMRR KTA
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