Gene VC0395_A0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0727 
Symbol 
ID5137867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp753693 
End bp754958 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content47% 
IMG OID640532185 
Producthypothetical protein 
Protein accessionYP_001216677 
Protein GI147674618 
COG category[S] Function unknown 
COG ID[COG5339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000150296 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA TAAAAATGAT CGGTGCAGTG GGTGGGGCTG TTGCGCTAGG TTTGTGTTGG 
CCACTCGCGG TGGGCCAAAT CGGTGAATCT GCGATCAAAG ATGGCCTCAA CAATTTTGAA
AGCTCATCAA CCAAGGCTGA ACTGGTTAAC TATCAGCGCG GTTATCTGTC ATCACAAATG
CAGACGCGTT ACAAAATCAC AGACCCGACG ATTGTGGCGC AGTTAGAAGC AGAAGGTATT
CCGACCGAAA TTTTAGTCGA CAGTACACTG ACTCATGGCC TGATGGGGGT GTCAGCGGTA
TCAACATTGC CGCAATTCCC TGAGTTTCCA CTGCAGATTC TTTCGAATAC CAAGTTAAAC
GGTAACACCG ATTACACGGT GAAGCTGGAA CAGTGGAACT ACGTATTCCA AGGTGAAGAG
CCTGTTGCAG TGACCATTGA ACCGGCGCAA ATGAGCGGTT CTTTAACGAC ATTGGGTGAA
ATGACGTTCC AACTGAACGT ACCAAAGATC ATTTTGGATT TTGAAAACCA AGCGCAGATG
GTACTCAGCC AGATCACCGG TGACGGTCAA GGTAAAGAGA GTGATGGTTT GTGGCTAGGC
GCACAGAATT TCAAGCTGGA TAAACTGAGT GTCAACCAAG AGGGACAAAC GGAGTTTGAT
ATGGGTGGTT TTACTTACCA TTTCACTTCA GGGTTGGATA CCACACAGAC TCGTTTTACC
ACGGCTCACA AAATGAAGAT TGCCGATGCC AAATACAGCG GCGGCGAGTT TAAAGAGTTC
GCTTTAGATT TCACGTTGGG GGACTTGGAT ACCACGGCCA CCAAAGCGCT GTCTAAACTT
TATCAAGGTG CGCCAGAGAT GACCGAGCAG GATGTTGAGC AGATCTTGCC ACAAGTGGAA
GCACTGTTCA GTAAAGGGTT CTTCGTTTCA GTGGATAACT TCTCGGCCAA TATTTCTGGT
GGTGATTTTG CATCGAATTG GCGACTGAAT GTGCCTGAAG GGACGGAAAA TCTACTGCAA
GATCCGATGG CGGTGATCCC AGCGCTGACC GGGCAGACTA AAACGTATAT TTCCAACCAG
TTGGTGACGG CTTTCCCATT TATTGCACAA GGGATTGACC AGCTCATGAT GATGGAAATG
ATGACTCAAG ATGATAAAGG CTACACCCTA CAAGCGGAAA TCAAAGAGGG TAATGTGGTA
TTCCCGAACG GAAAAACCAT GCCACTCGTC ATGTTGTTAA TGCCGCTGAT GATGTCACAA
GGCTAA
 
Protein sequence
MKSIKMIGAV GGAVALGLCW PLAVGQIGES AIKDGLNNFE SSSTKAELVN YQRGYLSSQM 
QTRYKITDPT IVAQLEAEGI PTEILVDSTL THGLMGVSAV STLPQFPEFP LQILSNTKLN
GNTDYTVKLE QWNYVFQGEE PVAVTIEPAQ MSGSLTTLGE MTFQLNVPKI ILDFENQAQM
VLSQITGDGQ GKESDGLWLG AQNFKLDKLS VNQEGQTEFD MGGFTYHFTS GLDTTQTRFT
TAHKMKIADA KYSGGEFKEF ALDFTLGDLD TTATKALSKL YQGAPEMTEQ DVEQILPQVE
ALFSKGFFVS VDNFSANISG GDFASNWRLN VPEGTENLLQ DPMAVIPALT GQTKTYISNQ
LVTAFPFIAQ GIDQLMMMEM MTQDDKGYTL QAEIKEGNVV FPNGKTMPLV MLLMPLMMSQ
G