Gene VC0395_A0723 details

Gene Information

• Locus tag: VC0395_A0723
• ID: 5136114
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 749578
• End bp: 750186
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640532181
• Product: hypothetical protein
• Protein accession: YP_001216673
• Protein GI: 147674335
• COG category: [K] Transcription
• COG ID: [COG3070] Regulator of competence-specific genes

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTAAAG GATCAATGGA TATGAATGAG CAACAGTTTT TCGACTACGT AACTAAGTTT 
GGCGCCTACC AAAAACGCTC GATGTTTGGT GGTATTGGCT TGTTTCAACA CGACGCTATG 
TATGTGTTGG TCAGTGAAGA CCGCATTTTT GTGCGTGGTG GAGAAGAGCT CGACCCTGAG 
CTCTTGGCCT TAGGGTGCGA GAAATATCGC CATGTTAAAA AACAGACAAC GGCAACCGTA 
AACTATTACG ACATCACTGA ACTGTATGAG CAACATCACC CTGAGCTAGA CTCGATTATT 
GAACGCTCGA TTCAGTTTTC TGTGAATCAG CGGGAATTTC AACGCTCAGC AGCCAGTCGT 
CGTCTACGGG ATTTACCCAA TATGCAACTG ACTTTGGAGC GTATGGTAAA AAAAGCGGGC 
ATTGACGATG TGGAAACTTT TATGAGCCTC GGTGCGCCAG AAGTGTTTAA TAAGGTGCGT 
CAAGCTTATG GAAGTGATGT CGATGTAAAA CTACTGTGGA AGTTTGCGGG TGCGATTGAA 
GGCATTCACT GGAAACTGCT GCAAGAGCCG CGTAAGCGCC AACTGTTAGA AAGTTGTCAG 
CAGCGTTAA 

 

Protein sequence

MIKGSMDMNE QQFFDYVTKF GAYQKRSMFG GIGLFQHDAM YVLVSEDRIF VRGGEELDPE 
LLALGCEKYR HVKKQTTATV NYYDITELYE QHHPELDSII ERSIQFSVNQ REFQRSAASR 
RLRDLPNMQL TLERMVKKAG IDDVETFMSL GAPEVFNKVR QAYGSDVDVK LLWKFAGAIE 
GIHWKLLQEP RKRQLLESCQ QR