| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0714 |
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| Symbol | clpA |
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| ID | 5136989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 737632 |
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| End bp | 739902 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532172 |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_001216664 |
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| Protein GI | 147674845 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAACA AAGAATTAGA GTCGAGTCTA AACGGCGCGT TCGCTCGGGC ACGAGACAAA
AGACATGAAT TTATGACCGT CGAGCACCTC CTACTTGCAT TGTTGGAAAA CGATGCAGCG
CGGGAAGCCC TGTTAGCCTG TCAAGCCGAC ATTGATGTAT TACGCCGTGA GCTGGATACT
TTTATCGACC AGACCACGCC TCTTATCCCC AAAAATGACG AAACTCGCGA GACACAACCG
ACGTTGAGTT TCCAACGCGT ACTGCAACGC GCGGTGTTCC ACGTGCAATC TTCCGGTCGA
AGCGAAGTGA CGGGAGCCAA CGTGCTGGTG GCGATTTTCA GTGAGCAAGA GTCGCACGCG
GCCTATCTGC TGAAGAAAAA TGACATCAGC CGCTTGGACA TTGTTAACTT TATTTCGCAC
GGCATTACCA AAGCGTCTAA CCATAGTGAA GACTCTTCTT CCGATTCGTT TGGCAGCAGT
GATACTTCTG AAGAGGTGAG TGCTGACGAG CGTTTGGAAA GTTTTGCGAC CAACCTTAAT
CAGTTAGCAA AACAAGGCCA GATCGATCCA CTGATTGGCC GTGACAAAGA GTTGGAACGT
ACGATTCAAG TTCTGTGTCG CCGTCGTAAA AACAACCCAC TGCTGGTGGG AGAAGCGGGT
GTCGGCAAAA CTGCGATTGC GGAGGGCTTG GCATGGCGAA TTGTTGAAGG CAATGTGCCG
GAAGTGATTC AGCGCAGTGT GATTTATTCA CTGGATATTG GTTCGCTGTT AGCGGGCACC
AAATATCGTG GTGATTTCGA AAAACGTTTC AAATCGATTT TGAAACAGCT TGAGAAAGAG
AAAGACGCCA TCCTGTTTAT CGATGAAATT CACACCATCA TCGGTGCGGG TGCCGCTTCT
GGCGGTCAAG TCGATGCGGC GAACCTAATT AAGCCTCTGC TCAGTAGCGG TAAACTGCGT
TGTATCGGCT CAACCACCTA TCAAGAGTAC AGCAACATTT TTGAGAAAGA GCGTGCGCTA
TCTCGCCGCT TCCAAAAGAT TGATATTGTT GAGCCTTCAT TGGACGATAC CACCAAGATT
TTGATGGGAT TGAAAACCAA ATACGAAGCT CACCATGATG TGCGCTATAC CAATAAAGCG
CTGCGTGCTG CGGTTGAACT TTCAGCCAAA TACATTAATG AGCGTCATCT GCCTGATAAA
GCGATTGATG TGATTGATGA AGCGGGTGCG CGGGCACGTT TGATGCCAGC AAGCCGTCGT
AAGAAAACGG TCGGTGTGGC GGAAATTGAA TCCATGGTCG CCAAAATGGC GCGGATCCCA
GAAAAATCCG TCTCCTCTTC TGATAAAGAC ATCCTGAAGA ATCTGGATCA GAAGATGAAA
ATGTTGGTGT TTGGACAAGA TGCGGCGATT GATGTGCTGA CAGAGGCGAT CAAGCTGACC
CGTGCTGGAT TAGGCGCAGA ACATAAGCCA GTCGGTTCTT TCCTGTTTGC AGGTCCAACT
GGGGTTGGTA AAACAGAAGT GACTCTGCAG CTTTCTAAGC TGCTCGGTAT CGAACTGCTA
CGTTTTGATA TGTCTGAATA CGGTGAGCGC CATTCGGTAA GCCGTTTGAT TGGTGCACCT
CCAGGTTATG TGGGTTATGA CCAAGGTGGG TTATTGACGG ACGCTGTGAT TAAGCACCCG
CACTCGGTTG TTTTGTTGGA CGAAATTGAA AAAGCGCACC CCGATATTTT TAACTTGCTC
CTACAAGTGA TGGATAACGG TACGCTGACG GATAACAACG GCCGTAAAGC CGATTTCCGT
AACGTGATTC TTGTGATGAC CACCAACGCG GGTGTGGCCG AAACGGTGAA AAAATCGATT
GGTTTGATCC AGCAAGATAA TAGTCATGAT GCGATGTCGG AAATTAAAAA GGTGTTCACT
CCCGAATTCC GTAACCGTCT TGATCACATT ATCTGGTTCA ATAGCTTAGA TGAGCGTGTG
ATTCATCAAG TGGTCGATAA ATTTATCGTG GAACTGCAAG CTCAGTTGGA TGCGCGTGGC
GTTTCTCTGG AAGTCTCGGA AGATGCCCGC CACTGGTTAG CAGTGAAAGG TTATGACCGT
GAGATGGGCG CTCGTCCGAT GGGACGTGTG ATCCAAGAAC AACTGAAGAA ACCACTCGCC
AATGAGCTGT TGTTTGGCTC GTTAGTCGAT GGTGGCACAG TGAAAGTGAC GCTGAGTGAT
GACAGACTGG CTTTCGAGTA TTTCGGTACT CGCGAAGAGG TGGTCCACTA G
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| Protein sequence | MLNKELESSL NGAFARARDK RHEFMTVEHL LLALLENDAA REALLACQAD IDVLRRELDT
FIDQTTPLIP KNDETRETQP TLSFQRVLQR AVFHVQSSGR SEVTGANVLV AIFSEQESHA
AYLLKKNDIS RLDIVNFISH GITKASNHSE DSSSDSFGSS DTSEEVSADE RLESFATNLN
QLAKQGQIDP LIGRDKELER TIQVLCRRRK NNPLLVGEAG VGKTAIAEGL AWRIVEGNVP
EVIQRSVIYS LDIGSLLAGT KYRGDFEKRF KSILKQLEKE KDAILFIDEI HTIIGAGAAS
GGQVDAANLI KPLLSSGKLR CIGSTTYQEY SNIFEKERAL SRRFQKIDIV EPSLDDTTKI
LMGLKTKYEA HHDVRYTNKA LRAAVELSAK YINERHLPDK AIDVIDEAGA RARLMPASRR
KKTVGVAEIE SMVAKMARIP EKSVSSSDKD ILKNLDQKMK MLVFGQDAAI DVLTEAIKLT
RAGLGAEHKP VGSFLFAGPT GVGKTEVTLQ LSKLLGIELL RFDMSEYGER HSVSRLIGAP
PGYVGYDQGG LLTDAVIKHP HSVVLLDEIE KAHPDIFNLL LQVMDNGTLT DNNGRKADFR
NVILVMTTNA GVAETVKKSI GLIQQDNSHD AMSEIKKVFT PEFRNRLDHI IWFNSLDERV
IHQVVDKFIV ELQAQLDARG VSLEVSEDAR HWLAVKGYDR EMGARPMGRV IQEQLKKPLA
NELLFGSLVD GGTVKVTLSD DRLAFEYFGT REEVVH
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