| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0628 |
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| Symbol | serS |
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| ID | 5136552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 669867 |
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| End bp | 671174 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532086 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001216578 |
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| Protein GI | 147674801 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0256221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGATT CTAAATTACT TCGTACTGAG CTGGACGAAA CAGCTGCAAA ATTGGCACGT
CGCGGTTTTA AACTCGACGT GGAGACTATC CGTACTCTTG AAGAACAACG TAAGTCCATT
CAAGTAGAAG TTGAGAATTT ACAATCCACG CGTAACTCCA TCTCCAAGCA AATCGGTCAA
CTGATGGCGT CTGGCGACAA AGCGGGCGCA GAAGCGGTTA AGCAACAAAT CGGCACCTTG
GGTGACGATC TGGATGCGAA AAAAGTGGAA TTGGATGCGG TTATGGCGCA ATTGGATGCG
ATCACCCAAA CCGTGCCTAA CATTCCAGAC GATGCAGTGC CAAACGGTAA AGACGACAGC
GAAAACGTAG AAGTGTCTCG TTGGGGCACC CCAAAAACGT ATGATTTTGA AGTGAAAGAT
CATGTGGATT TGGGTGAAAT GGGCGACGGT CTGGATTTCG CAAGCGCAAC CAAGATCACG
GGTGCGCGTT TTGTGGTGAT GAAAGGTCAA TTTGCTCGTT TGCACCGTGC TATCGCACAG
TTCATGTTGG ATCTGCACAC CGATCAACAC GGCTACACTG AGCTGTATGT GCCTTATCTA
GTGAACGCTG AAACGCTGTT CGGTACAGGC CAATTACCAA AATTCGGTCA AGATCTGTTC
CACACTGAGC CTCTGACTGA GAAAGCCAGT GATGAAGAGC CACGCCGTCT ATCACTGATC
CCAACCGCAG AAGTGCCAGT GACCAACTTA GTGCGCGACA CCATTTTGGA TGAAGCTGAA
CTGCCTCTGA AAATGACCGC ACACACGCCA TGCTTCCGTT CTGAAGCCGG TTCTTACGGT
CGTGATACTC GTGGTCTGAT CCGTATGCAC CAGTTTGATA AAGTGGAACT GGTACAAATC
ACTCGCCCTG AAGATTCTAT GGCGGCATTG GAAGAGTTGA CTGGCCATGC AGAAAAAGTT
CTGCAACTGC TGGAGCTGCC TTACCGCAAA GTGATTCTGT GTACGGGCGA CATGGGCTTT
GGCTCGTGCA AAACTTACGA CTTGGAAGTT TGGGTTCCAG CGCAGAAGAC GTACCGTGAA
ATCTCTTCTT GTTCAAACAT GTGGGATTTC CAAGCGCGTC GTATGCAAGC GCGTTTCCGC
CGCAAAGGTG AGAAGAAACC TGAGTTGGTG CACACGCTGA ACGGCTCTGG TCTGGCGGTG
GGTCGTACCA TGGTCGCGAT TTTGGAAAAC TACCAAGAAG CCGATGGTCG CATTGCGATT
CCTGCGGTAC TGCAAAAGTA CATGGGCGGT TTAACCCATA TCGGTTAA
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| Protein sequence | MLDSKLLRTE LDETAAKLAR RGFKLDVETI RTLEEQRKSI QVEVENLQST RNSISKQIGQ
LMASGDKAGA EAVKQQIGTL GDDLDAKKVE LDAVMAQLDA ITQTVPNIPD DAVPNGKDDS
ENVEVSRWGT PKTYDFEVKD HVDLGEMGDG LDFASATKIT GARFVVMKGQ FARLHRAIAQ
FMLDLHTDQH GYTELYVPYL VNAETLFGTG QLPKFGQDLF HTEPLTEKAS DEEPRRLSLI
PTAEVPVTNL VRDTILDEAE LPLKMTAHTP CFRSEAGSYG RDTRGLIRMH QFDKVELVQI
TRPEDSMAAL EELTGHAEKV LQLLELPYRK VILCTGDMGF GSCKTYDLEV WVPAQKTYRE
ISSCSNMWDF QARRMQARFR RKGEKKPELV HTLNGSGLAV GRTMVAILEN YQEADGRIAI
PAVLQKYMGG LTHIG
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