Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0591 |
Symbol | |
ID | 5136460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 630421 |
End bp | 631341 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640532049 |
Product | putative chitinase |
Protein accession | YP_001216541 |
Protein GI | 147675425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACCG TTCTTGCATT AGCAGTGGGA ATGGCGATGC CTGCAGTGCA GGCGGCAATC AATAGTGACG CTTCTGTGGT TGGTACGGAA AGCCAGTGGT GGAATACCTA CAAAGTGACG CTCACTAACA ACGGCAATCA GCCAGTTGAA CTGCGTGATG CGAGCATTGC GTTTGATACC AACCTTTCAC TTTCAACACC TTCTTGGTCA GCACAAGGCA TTTCTTACCC AAGCATGAGC TTTAGCAGCA ATGCGCAAGG TTCAGTGTTT AGCAATCGCT TAACTCTGAG CTTTGATCAA GGCAGTTGGG TAAAAACGCA ACTGCTACCG GGGGCAAGCA TTGATCTTAC CTTAGGTGTC AGTGGTGTGC TCGAGCTGAG CCTGCTGCAA AGCACGATCG CTCTGGAAAC CGATGGTGAA GTGGAGCCGG GCGAACCAGA AATTTCGCTA GAGCTGGCTT CACCCGTTCA AGGTGCAGAG TTCATTGAAG GCCAGACCGT TGCGATTGTG GCTAACGTTA CTGCAACCAA CACAACAGTA AAAACTGTCA CGTTCTTGGT GGATGGTGAG CAGATTGCGT TGCTTGAGCA AGCGCCATTT CAAGCTAGCT GGACTGCGGC TGGTGAGGGG GCTCACTCCA TCAAAGCCAT CGTGGAAGAT GCTTCTGGTT TGCTGAAAGA GCAAGCGGTA CGTATTACCG TCAAAGCCGA AGAAATTGAT CCACCGGTTG AGCCAGAAGT ACCCGTTGCA CCTGTGATTG AGTTGACCAA TCCACGTAAC GGACAAAGCG TATTCTTGGG CAAAGTCACC ACACTGGCTG CGAATGCGAC AGACGAAAAT AATGATCTCA CCGCAGTTGA GTTTTTGGTG AATGGCGAAT CGATTGGCCG TGTTACTCAG GCTCCATATC AACTGGCTTA G
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Protein sequence | MPTVLALAVG MAMPAVQAAI NSDASVVGTE SQWWNTYKVT LTNNGNQPVE LRDASIAFDT NLSLSTPSWS AQGISYPSMS FSSNAQGSVF SNRLTLSFDQ GSWVKTQLLP GASIDLTLGV SGVLELSLLQ STIALETDGE VEPGEPEISL ELASPVQGAE FIEGQTVAIV ANVTATNTTV KTVTFLVDGE QIALLEQAPF QASWTAAGEG AHSIKAIVED ASGLLKEQAV RITVKAEEID PPVEPEVPVA PVIELTNPRN GQSVFLGKVT TLAANATDEN NDLTAVEFLV NGESIGRVTQ APYQLA
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