Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0582 |
Symbol | |
ID | 5137595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 622291 |
End bp | 622722 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640532040 |
Product | putative lipoprotein |
Protein accession | YP_001216532 |
Protein GI | 147674297 |
COG category | [S] Function unknown |
COG ID | [COG3126] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000000375847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGG TTCTACTTAT TGTTATCTCT ATCCTGTTTG GTTCTGTACT CGTAGGCTGC CAAATGAATG AATCCAACAA GACACAAGAT AAAATCCAAT CGATTACGGG GAGTGTGGCA TACCGTGAAC GCATTGCGTT GCCGGATAAT GCGGTGGTGA CAGTTTACCT ACAAGACGTT TCCTTGGCTG ATGCGCCAGC GACGGTTATC GCAAAACAGA ACTTCATCAC TAATGGTATG CAAGTACCAC TTGAATTCAA CCTAGCGTAT GACAGCCGCA AGATCAAAGC GAGTCACCGT TACAGTGTGA GTGCGCGTAT CGAAGTCGAC GGTAAGCTAC GTTTCATCAC GGATACTCAT TACGGTGTGA TCACCGATCC TGAAGCGACT AAACACGTAC CTATGATGCT GATTGGTGTG CATGGCGAAT AA
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Protein sequence | MKKVLLIVIS ILFGSVLVGC QMNESNKTQD KIQSITGSVA YRERIALPDN AVVTVYLQDV SLADAPATVI AKQNFITNGM QVPLEFNLAY DSRKIKASHR YSVSARIEVD GKLRFITDTH YGVITDPEAT KHVPMMLIGV HGE
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