| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0565 |
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| Symbol | fadJ |
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| ID | 5135643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 606927 |
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| End bp | 609053 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532023 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001216515 |
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| Protein GI | 147673662 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.486274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACA ACAATGCATT TCAGCTCTCG TTTGATGAGC AGCATTACGC TTGGCTGGCG
ATTGATGTCC CGGGCGAAAA AATGAATACC CTGCAAGCGG CATTTGCAGA AGAGATGCAA
GCCGTTTTTG CAACGCTCAA TGAAAAACGA GGACAGATCA AAGGGCTGAT TATCCACTCT
CTTAAGCCGG ATAACTTTAT TGCGGGTGCG GATGTCCGCA TGTTGGAAGC TTGCCAATCG
GTACATGAAG CACAAGCGTT AGCCTCGCAG GGGCAACAGA TGTTCCAGCA GCTTGCCGAT
TTGCCTTTCC CTGTGGTCGC GGCGATTCAC GGCCCTTGCT TAGGCGGTGG TTTAGAATTG
GCTCTGGCGT GTGATTATCG TGTCTGTACT GAAGATGAGG TAACACGTCT AGGCTTACCA
GAAGTGATGT TGGGTTTGCT TCCGGGCTCT GGCGGTACGC AGCGTTTACC ACGTTTGATT
GGTTTACTGC CTGCGCTGGA CCTCATCTTA ACGGGCAAAC AATTGCGTGC CAAAAAGGCC
AAGAAATTGG GTGTGGTTGA TGCATGTGTT CCGCACTCAG TACTGTTGGA TGTGGCCAAA
CGTCTTCTAG AAGAAAAAGG GCACAAAAAG CGCGCTCAAG TTACGCTACC GATCAAAGAA
AAACTGCTCG CCAATACCGG CTTGGGGCGT AAGTTGATTT TTGACCAAGC GGCCAAGAAA
ACGCAGCAGA AAACGCGTGG TAACTACCCC GCAGCGCAAG CCATTTTAGA GGTCATTCAG
TATGGCCTAG AAAAAGGGAT GCATGCTGGC TTGGAATATG AAGCCAAGCG TTTCGCTGAA
TTGGTGATGA CCCGAGAATC GAAAGCACTG CGCTCCATTT TCTTTGCGAC CACAGAGATG
AAAAAAGATC TCGGTGCGGA TGCCAAACCC GCACCTGTGG CGGCTGTGGG CGTGCTCGGT
GGTGGTTTGA TGGGGGCTGG CATCAGTCAC GTTACTGTGG CGAAAGCCAA AACATCGGTG
CGCATCAAAG ATGTGGCGAA TGATGGTGTG CTCAATGCCC TCAATTACAA CTACAAGCTG
TTTGATAAGC AGAGACAGCG CAAGATTTTG ACTAAAGCAC AGCTGCAAGC GCAGATGTCG
CAGCTCTCGG GTGGGACTGG CTTTGTGGGT TTTGATCGCT GTGATGTAGT GATAGAGGCT
GTGTTTGAAG ACCTGAAACT TAAGCAACAA ATGGTGGCGG ATATTGAAGC GAATGCCAAA
CCGACAACGA TTTTTGCGAC CAACACATCC TCGCTGCCGA TCCATCAGAT CGCGAGCCAA
GCGCAGCGTC CGCAAAATAT TGTGGGTTTA CATTATTTCA GCCCAGTTGA AAAAATGCCG
TTGGTGGAAG TGATTCCTCA CGCGACCACC TCGGATGAAA CCATTGCGAC CGTGGTGACA
TTGGCACGTA AGCAGGGCAA AACACCGATT GTTGTTAAAG ACTGTGCTGG TTTTTATGTC
AACCGCATTT TAGCGCCTTA TATGAATGAA GCCGCGCAAG TGCTGATGGC GGGTGAACCT
ATCGAAAAAC TCGATGCTGC GTTACTGGAT TTTGGTTTCC CAGTGGGGCC TATCACCTTG
CTTGATGAAG TAGGGGTCGA TATCGGAGCC AAGATCATGC CGATTTTGGT TAAAGAGCTT
GGGCCGCGTT TCCAAGGACC GGACGTCTTT GATGTGCTTT TGAAAGATAA CCGTAAAGGC
CGGAAAAGCG GTAAAGGTTT CTACACCTAC AAAGGCAGCA AGAAGAAAGA AGTCGATAAA
TCCGTTTATA AACTGCTGAA GTTAACCCCG GAATCTAAGC TAAACGACAA AGAAATCGCG
ATGCGTTGCT TGTTGCCTAT GCTCAATGAG GCGGTTCGTT GTCTCGATGA AGGCATTATT
CGCAGTGCAC GTGATGGCGA TATGGGCGCG ATTTTTGGCA TCGGTTTCCC GCCGTTCTTA
GGTGGGCCTT TCCGTTACAT GGACACGCTT GGTTTAACCA AAGTGGTGGA AATGATGAAC
CAACACACCG AGAAATATGG AGAGCGGTTT GCTCCATGTG ACGGTTTGTT GACGAGAGCG
GGATTGGGCG AGAAGTTCTA CCCCTAG
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| Protein sequence | MDNNNAFQLS FDEQHYAWLA IDVPGEKMNT LQAAFAEEMQ AVFATLNEKR GQIKGLIIHS
LKPDNFIAGA DVRMLEACQS VHEAQALASQ GQQMFQQLAD LPFPVVAAIH GPCLGGGLEL
ALACDYRVCT EDEVTRLGLP EVMLGLLPGS GGTQRLPRLI GLLPALDLIL TGKQLRAKKA
KKLGVVDACV PHSVLLDVAK RLLEEKGHKK RAQVTLPIKE KLLANTGLGR KLIFDQAAKK
TQQKTRGNYP AAQAILEVIQ YGLEKGMHAG LEYEAKRFAE LVMTRESKAL RSIFFATTEM
KKDLGADAKP APVAAVGVLG GGLMGAGISH VTVAKAKTSV RIKDVANDGV LNALNYNYKL
FDKQRQRKIL TKAQLQAQMS QLSGGTGFVG FDRCDVVIEA VFEDLKLKQQ MVADIEANAK
PTTIFATNTS SLPIHQIASQ AQRPQNIVGL HYFSPVEKMP LVEVIPHATT SDETIATVVT
LARKQGKTPI VVKDCAGFYV NRILAPYMNE AAQVLMAGEP IEKLDAALLD FGFPVGPITL
LDEVGVDIGA KIMPILVKEL GPRFQGPDVF DVLLKDNRKG RKSGKGFYTY KGSKKKEVDK
SVYKLLKLTP ESKLNDKEIA MRCLLPMLNE AVRCLDEGII RSARDGDMGA IFGIGFPPFL
GGPFRYMDTL GLTKVVEMMN QHTEKYGERF APCDGLLTRA GLGEKFYP
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