| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0541 |
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| Symbol | luxO |
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| ID | 5136982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 580984 |
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| End bp | 582351 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531999 |
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| Product | LuxO repressor protein |
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| Protein accession | YP_001216491 |
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| Protein GI | 147673171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGAAG ACACGGCGTC GGTGGCGGCG CTGTATCGTT CTTACCTCAC ACCGCTGGAT
ATTGATATCA ATATCGTGGG TACCGGACGC GATGCCATCG AGAGTATTGG CCGTCGCGAG
CCTGACTTAA TCCTGCTGGA TTTACGTTTG CCAGATATGA CGGGGATGGA CGTACTCTAT
GCAGTGAAAG AGAAATCACC GGATGTGCCT ATCGTGTTTA TGACCGCTCA TGGTTCGATT
GATACGGCGG TTGAAGCCAT GCGTCATGGT GCGCAAGACT TTTTGATCAA GCCGTGTGAA
GCGGACCGAC TGCGGGTCAC AGTGAATAAT GCGATTCGCA AAGCCTCGAA ACTCAAAAAC
GATGTTGATA ATAAAAATCA AAACTATCAA GGCTTTATTG GTAGCAGTCA AACCATGCAG
GCGGTGTACC GCACCATTGA CTCTGCGGCG AGCAGCAAAG CCAGTATTTT TATTACCGGC
GAAAGTGGTA CAGGTAAAGA AGTGTGCGCG GAAGCGATTC ATGCCGCGAG CAAGCGTGGA
GATAAGCCAT TTATCGCCAT CAACTGTGCG GCCATTCCGA AAGATCTGAT TGAAAGTGAG
TTGTTTGGTC ACGTCAAAGG GGCTTTTACT GGGGCGGCGA CTGAGCGTCA AGGCGCGGCA
GAAGCGGCTG ATGGGGGAAC CCTCTTTTTG GATGAATTGT GCGAAATGGA TCTGGATCTG
CAGACCAAAC TTCTGCGCTT TATTCAGACA GGGACATTCC AAAAAGTCGG CTCTTCCAAA
ATGAAAAGCG TGGATGTGCG TTTTGTGTGT GCAACGAACC GCGATCCGTG GAAGGAAGTG
CAAGAAGGAC GCTTTCGTGA AGACCTGTAC TACCGCTTGT ATGTGATCCC GCTGCATTTA
CCGCCATTGC GCGCGCGTGG TGATGATGTG ATCGAGATTG CTTATTCACT GCTTGGCTTT
ATGTCCAAGG AAGAGGGCAA AGATTTTGTC CGTTTGTCGG CTGAAGTGGT GGAGCGTTTT
CGCCAATACG AGTGGCCGGG CAACGTGCGT CAATTGCAAA ACGTTTTGCG CAACGTGGTT
GTGCTCAATG AAGGTCGTGA AATCACCCTA GATATGCTGC CTCCTCCTCT TAATCAAATG
TCCGCGCCGA TCAATCGGGC TTTACCGCTT GCGCATGAGA ATAAAGTATC CGTGCATGAG
ATTTTTCCGC TGTGGATGAC CGAAAAACAA GCTATTGAAC AAGCCATCGA AGCGTGTGAT
GGCAACATTC CCCGTGCCGC AACCTATCTG GATGTCAGCC CGTCAACCAT CTATCGCAAG
CTGCAAACTT GGAATGAAAA AGTGAAAGAA AAAGAGAAGG AACGGTAA
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| Protein sequence | MVEDTASVAA LYRSYLTPLD IDINIVGTGR DAIESIGRRE PDLILLDLRL PDMTGMDVLY
AVKEKSPDVP IVFMTAHGSI DTAVEAMRHG AQDFLIKPCE ADRLRVTVNN AIRKASKLKN
DVDNKNQNYQ GFIGSSQTMQ AVYRTIDSAA SSKASIFITG ESGTGKEVCA EAIHAASKRG
DKPFIAINCA AIPKDLIESE LFGHVKGAFT GAATERQGAA EAADGGTLFL DELCEMDLDL
QTKLLRFIQT GTFQKVGSSK MKSVDVRFVC ATNRDPWKEV QEGRFREDLY YRLYVIPLHL
PPLRARGDDV IEIAYSLLGF MSKEEGKDFV RLSAEVVERF RQYEWPGNVR QLQNVLRNVV
VLNEGREITL DMLPPPLNQM SAPINRALPL AHENKVSVHE IFPLWMTEKQ AIEQAIEACD
GNIPRAATYL DVSPSTIYRK LQTWNEKVKE KEKER
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