Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0529 |
Symbol | motY |
ID | 5136244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 569104 |
End bp | 569988 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531987 |
Product | sodium-type flagellar protein MotY |
Protein accession | YP_001216480 |
Protein GI | 147674163 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000708227 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT GGGTTATCAC AAGTTTGTTT GCCATAAGCA TGTTATCAGC GTCTGTCGCT TCGGCGTTGG AAGTGCGTTA TGTGGCAACA CCACAACAGT CTACGTGGCA AATGGCAACC AATACTCCGT TGGAATGCCG CCTTGTGCAC CCGATCCCCA ACTATGGTGA CGCCGAGTTT TCGTCTCGCG CTGGCAAGAA AATCAATCTC GACTTTGAAT TAAAAATGCG TCGCCCAATG GGGGATACCC GTAATGTCAG CCTAGTCTCT ATGCCTCCGG TTTGGCGGCC GGGGGAAGGC GCAGATCGCA TCACGAATCT GCAGTTTTTC AAACAGTTTG ATGGTTATAT TGGTGGACAG ACCGCGTGGT CGTTACTCAG TGAACTGGAA AAGGGGCGCT ACCCGACCTT CAGTTATCAA GATTGGCAAA GCCGCGATCA ACGTATTGAG GTTGCGCTCT CTTCAGTGCT GTTTCAGCAA CCCTACAATG AGTTTAGTGA CTGTATTTCT AAGCTATTGC CTTACAGCTT TGAAGACATC TCGTTTACGA TTTTACACTA CGACCAAGGC ACCAGTGTTG AGTTGAATAA AGCGTCACAA AAGCGTTTGG CACAGATCGC TGAATATGTA CGCTATAACC AAGATATTGA TTTAGTGCTG GTTTCCACCT ATACCGATTC CACGGACACC AATAACAATA GCCAAAATTT GTCGGAACAA CGGGCTGAGG TACTGCGTGA ATACTTTAAA TCGATCGGGT TGCCGGAAGA TCGTATTCAA GTGCAGGGCT ATGGCAAACG TCGGCCGATC GCCGATAATG CTTCGCCGAT TGGTAAAGAC AAAAACCGCC GCGTGGTGAT TTCACTAGGC CGAACTCAGG TGTGA
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Protein sequence | MNKWVITSLF AISMLSASVA SALEVRYVAT PQQSTWQMAT NTPLECRLVH PIPNYGDAEF SSRAGKKINL DFELKMRRPM GDTRNVSLVS MPPVWRPGEG ADRITNLQFF KQFDGYIGGQ TAWSLLSELE KGRYPTFSYQ DWQSRDQRIE VALSSVLFQQ PYNEFSDCIS KLLPYSFEDI SFTILHYDQG TSVELNKASQ KRLAQIAEYV RYNQDIDLVL VSTYTDSTDT NNNSQNLSEQ RAEVLREYFK SIGLPEDRIQ VQGYGKRRPI ADNASPIGKD KNRRVVISLG RTQV
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