| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0516 |
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| Symbol | nagE |
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| ID | 5135681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 552060 |
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| End bp | 553631 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531974 |
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| Product | PTS system, N-acetylglucosamine-specific IIABC component |
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| Protein accession | YP_001216467 |
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| Protein GI | 147675085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATATTC TTGGATATGC GCAAAAGTTA GGTAAAGCAT TGATGCTACC TATCGCTACG
CTACCTGTAG CGGCGCTCTT ACTTCGTTTA GGTCAACCAG ACCTGTTAGG CATTCCATTC
ATGGCTGCAG CGGGCGATGC AATTTTTAGC CAGCTGCCAC TACTGTTTGG TTTGGGTATT
GCCATTGGTT TATCGAAAGA TGGATCTGGC GCCGCAGGTC TAGCGGGTGC AGTAGCTTAC
TTTGTTCTGA GTGCAACGGC AAAAACGATT GATGCTTCAA TCAACATGTC TTTCTTTGGC
GGTATCTTCG CAGGTATCAT CGCAGGGCAC TCTTACAACG CGTTCCACAC TACACGTCTG
CCAGAGTGGC TAGCATTCTT TGCTGGTAAG CGTTTAGTGC CAATTATGGC GGGTCTGTTC
GCTCTGGTTG CTGGTGCGCT TTCTGGCGTT ATCTGGCCAT CAATTCAAGG TGGATTAGAT
GCGCTGGCGC ATGCCGTCTC TACATCAGGT GCTTTAGGCC AATTTGTTTA CGGTACTCTG
AACCGTGCTC TGATCCCTGT AGGTTTACAC CACGTTCTGA ACTCTTACTT CTGGTTCGGC
ATGGGTACCT GTCAAGAGAT CCTAGTTTCA GGTGCTCAAG CCGCTGGTCA AGCACTGCCT
GCACTCGAAA AACTGTGTGT GGATCCAGCT CTAGCGAAAA CCCTAGTTGT GGGTCAAGAG
CATACTTTTG CGTTCAAAAA TGCGGTAACG CCTGAAATCA CAGCTGTGGT AAAAGAAGTG
ACTGAAGTGG TTAAATCTGG CGACCTACAC CGTTTCTTCG GCGGCGATAA GAGCGCTGGG
GTATTCATGA ACGGCTTCTT CCCTGTCATG ATGTTCGGTC TACCAGGTGC TGCACTTGCT
ATGTACCTAG CCGCTCCAGC TGAGCGTCGT CACCAAGTGG GTGGTGCACT GTTCTCTGTT
GCGTTCTGTT CATTCCTAAC AGGTATCACT GAGCCTCTAG AGTTCATGTT TGTGTTCCTA
GCACCTGCGC TGTATGCAAT GCATGCGGTA TTTACAGGTC TGTCACTGGT TGTGGCTAAC
ATGTTTGGCA CACTGCATGG TTTCGGTTTC TCAGCAGGTC TTATCGACTT CCTGTTGAAC
TGGGGTCTAG CAACGAAACC TGCAACTCTG TTTGTGATTG GTCTGGCGTT CTTTGCTCTG
TACTTCTTTA CGTTCACATT CGCCATTCGT GCGTTCAACC TGAAATCTCC AGGTCGTGAA
GACGAAGAAG TGGAAACAGA AACAGACTCC GCTGATGCAT CTAAAGGTGA TTTGGCTCGC
CAATACCTGA AAGCACTGGG TGGTCATGAA AACCTGACAT CTATCGATGC GTGCATCACA
CGTCTACGTC TGACTCTGAA AGACCGCTCT GTTGCAGATG AAGCGGTACT GAAGAAACTG
GGCGCGAAAG GTGTTGTGAA ACTGGGTGAA AATAACCTGC AAGTTATCCT TGGCCCTCTA
GCAGAAATCG TCGCGGGTGA GATGAAAGCC ATCAGCCCGA AAGAAGATCT TTCTGACGTT
AAACTGCCTT AA
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| Protein sequence | MNILGYAQKL GKALMLPIAT LPVAALLLRL GQPDLLGIPF MAAAGDAIFS QLPLLFGLGI
AIGLSKDGSG AAGLAGAVAY FVLSATAKTI DASINMSFFG GIFAGIIAGH SYNAFHTTRL
PEWLAFFAGK RLVPIMAGLF ALVAGALSGV IWPSIQGGLD ALAHAVSTSG ALGQFVYGTL
NRALIPVGLH HVLNSYFWFG MGTCQEILVS GAQAAGQALP ALEKLCVDPA LAKTLVVGQE
HTFAFKNAVT PEITAVVKEV TEVVKSGDLH RFFGGDKSAG VFMNGFFPVM MFGLPGAALA
MYLAAPAERR HQVGGALFSV AFCSFLTGIT EPLEFMFVFL APALYAMHAV FTGLSLVVAN
MFGTLHGFGF SAGLIDFLLN WGLATKPATL FVIGLAFFAL YFFTFTFAIR AFNLKSPGRE
DEEVETETDS ADASKGDLAR QYLKALGGHE NLTSIDACIT RLRLTLKDRS VADEAVLKKL
GAKGVVKLGE NNLQVILGPL AEIVAGEMKA ISPKEDLSDV KLP
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