Gene VC0395_A0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0475 
Symbol 
ID5136287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp507322 
End bp507639 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content46% 
IMG OID640531933 
Producthypothetical protein 
Protein accessionYP_001216426 
Protein GI147673275 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0369848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGGTG AAGCACTTAA AGACTTTCTT TTCGACAAAG CTGACGACAT GAAGGCGGTC 
GATATCGTAA CTCTAGATGT AAAAGAGAAA TCCAGCGTTA CTGATTACAT GATTGTCTGT
ACTGGCACAT CCAAAAGACA TGTCGCCTCC ATCGCTGAAC ACGTGGCCAA TGAAGCCAAA
CTTTCTGGCC TGCAACCACT GGGTATGAAC GGCGAAAATG AAGGTGAATG GGTCGTTCTG
GATATGGGTA GCGTAATGTT GCATGTGATG CAAGAAGCGC CACGCGAACT CTATCAATTG
GAAAAACTCT GGGGTTAA
 
Protein sequence
MQGEALKDFL FDKADDMKAV DIVTLDVKEK SSVTDYMIVC TGTSKRHVAS IAEHVANEAK 
LSGLQPLGMN GENEGEWVVL DMGSVMLHVM QEAPRELYQL EKLWG