Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0475 |
Symbol | |
ID | 5136287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 507322 |
End bp | 507639 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640531933 |
Product | hypothetical protein |
Protein accession | YP_001216426 |
Protein GI | 147673275 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0369848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAAGGTG AAGCACTTAA AGACTTTCTT TTCGACAAAG CTGACGACAT GAAGGCGGTC GATATCGTAA CTCTAGATGT AAAAGAGAAA TCCAGCGTTA CTGATTACAT GATTGTCTGT ACTGGCACAT CCAAAAGACA TGTCGCCTCC ATCGCTGAAC ACGTGGCCAA TGAAGCCAAA CTTTCTGGCC TGCAACCACT GGGTATGAAC GGCGAAAATG AAGGTGAATG GGTCGTTCTG GATATGGGTA GCGTAATGTT GCATGTGATG CAAGAAGCGC CACGCGAACT CTATCAATTG GAAAAACTCT GGGGTTAA
|
Protein sequence | MQGEALKDFL FDKADDMKAV DIVTLDVKEK SSVTDYMIVC TGTSKRHVAS IAEHVANEAK LSGLQPLGMN GENEGEWVVL DMGSVMLHVM QEAPRELYQL EKLWG
|
| |