| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0472 |
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| Symbol | rodA |
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| ID | 5137251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 503808 |
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| End bp | 504929 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531930 |
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| Product | rod shape-determining protein RodA |
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| Protein accession | YP_001216423 |
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| Protein GI | 147674042 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000647199 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGG ATCCTGCAAC CGGACAAAAC CGGGCGCTGT TTGAGCGTTT TCATATTGAC
CTGCCTCTAC TGCTTGGCGT TCTTGCCCTA ATGGGATTTG GCTTAGTGGT GATGTACAGC
GCCAGTGGTC AGAGCCTAGC GATGATGGAT CGCCAAGCCA TGCGCATGGC CATGGCTCTC
ATCATCATGG TGATTCTGGC GCAAATTCCA CCGCGTACCT ATGAGAGTGC TGCGCCTATC
CTATTTTTTT GCGGCGTCAT ATTGTTGGTG TGTGTACTGC TGTTTGGGGA AATATCCAAA
GGCGCGCAAC GTTGGCTAGA TCTCGGTTTT GTCCGTTTTC AGCCTTCAGA ACTGCTCAAA
CTCGCCGTAC CTTTGATGGT GGCACGTTAC ATCGGCAAAC ACGCCCTGCC TCCTTCGTTC
AAAACCTTAT TCGCCTCGTT GGTAATGGTG TTCGTTCCAA CCATTTTAAT TGCGAAACAG
CCCGACCTTG GCACCTCAAT TTTGATTGCA GCATCAGGCA TTTTTGTAAT CTTCTTGGCG
GGCATTAGCT GGAAGCTGAT TACTGCAGCG GCCGTGGCCA TCGGCGCTTT TGTGCCTGTG
CTGTGGTTCT TCCTGATGCA CGAATACCAA AAAACCCGCG TGCGCACTTT GTTCGATCCT
GAATCTGACC CTCTTGGCGC TGGCTATCAC ATCATCCAAA GTAAAATTGC GATTGGTTCA
GGTGGCTTGT CAGGAAAAGG CTGGTTACAC GGCACACAAT CACAACTTGA ATTTCTTCCT
GAACGACATA CTGACTTTAT CTTTGCAGTC ATTGCCGAAG AATGGGGTAT GATCGGCATC
TTAGTCCTAC TAAGCCTCTA TTTATTTATT ATTGGTCGTG GACTTTATCT CGCTAGCCAT
GCACAAACGT CCTTTGGGCG TATGATGGCT GGCAGTATCG TATTGAGCTT CTTTGTTTAT
GTGTTTGTGA ACATAGGCAT GGTGAGCGGA ATTTTACCCG TGGTGGGTGT TCCACTACCA
CTGATTAGTT ATGGTGGAAC GTCGATGGTG ACACTGATGG CCGGTTTCGG TATTTTGATG
TCCATCCATA CTCACCGCAA AGCGTTTTCG AAGACGATTT AA
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| Protein sequence | MKMDPATGQN RALFERFHID LPLLLGVLAL MGFGLVVMYS ASGQSLAMMD RQAMRMAMAL
IIMVILAQIP PRTYESAAPI LFFCGVILLV CVLLFGEISK GAQRWLDLGF VRFQPSELLK
LAVPLMVARY IGKHALPPSF KTLFASLVMV FVPTILIAKQ PDLGTSILIA ASGIFVIFLA
GISWKLITAA AVAIGAFVPV LWFFLMHEYQ KTRVRTLFDP ESDPLGAGYH IIQSKIAIGS
GGLSGKGWLH GTQSQLEFLP ERHTDFIFAV IAEEWGMIGI LVLLSLYLFI IGRGLYLASH
AQTSFGRMMA GSIVLSFFVY VFVNIGMVSG ILPVVGVPLP LISYGGTSMV TLMAGFGILM
SIHTHRKAFS KTI
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