Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0458 |
Symbol | |
ID | 5135940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 489981 |
End bp | 491378 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531916 |
Product | putative capsular polysaccharide biosynthesis glycosyltransferase |
Protein accession | YP_001216409 |
Protein GI | 147673705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATGAAGG AAAAAAGCAG AATACGCATT ACTAACTATC ACGGTAAATT TTTCTACCGA TTAATTGATA GCATTTTTAT ATTAGTAATT ATGTATATAT CGATTAAGTC GAATCAGCAT GTTGTTACCA TGTCTTATAT TTCGGTTGCC TTGCTAGGGG TGCTTTTTTA CTCCTACATT GCAGAAAGTT TAGATATTTA CAGTGGTTGG CGAACAGCAA AGCTGCGTTC ACTTTCTTTA CATACGGCAT TCTGTTGGGC TGCGACCATC GCTAGCTTGA CCCTATTGGC TTACTTCTCC AAAACGGGGA TCGAGTTTTC TCGCATGGTG ATGGGCGCTT GGTTTGTCGG TTCTTTTATT GGCTTGATTG GTTGGCGTGT ATTGGCATTT GCGACCATTC ACTACATGCA CAAAAAGGGT CTGCATACCA AGAACGCGGT CATTATCGGT ATGACTACTC AAGGGCAAGA GTTATCAAAT AATCTGCTCA AAAACCCTGA ACTAGGGATT GTGATGCAAG GTTTTTATGA TGACCGTGCG CCTGAGCGCC TTAAAGAGGG GGCGCCTGTG CTGGGCAATA TCAATGATGC ATTAAGCCTT GCGAAAACTG GGCAGGTGCA AAATGTCTAT ATTGCTTTGC CGATGCAAGC GCAGCGCCGT ATCAACCAAA TTTTGGATGC GTTTTCGGAC AGTACGGTCA ATACCTACAT AGTGCCTGAC TTTTTTACTT TTAATTTACT GCACTCACGT TGGTACACGA TTGGTGATGT CAACGCGTTT AGCATTTTTG ATACCCCCTT TAATGGTTTG CTCAACTGGG TGAAACGCTT TGAAGATCTG GTGCTGAGCA GCTTGATTTT GCTCTTGATC AGCCCAGTGT TATTGGCCGT CGCTATTGGC GTTAAGCTGA GCTCGCCTGG CCCCATCATT TTTAAACAAA ACCGCTATGG TTTAGATGGC AAGCCAATCC AAGTTTGGAA ATTTCGCAGT ATGCGAGTGA TGGATAATGG CAGTCATGTG CAGCAAGCCA CCAAAGGCGA TCCACGAGTT ACACGATTTG GTGCGTTCAT TCGTCGAACA TCGCTGGATG AGTTACCGCA GTTTTTCAAT GTGTTGCAAG GAAGTATGTC GATCGTGGGG CCAAGGCCAC ATGCCGTTGC GCACAACGAG CAATATCGCA CCATAGTGAA TCGCTACATG CTGCGTCACA AAGTGAAGCC CGGCATTACT GGATGGGCAC AGATCAATGG TTGGCGTGGT GAAACCGATA CGCTCGACAA GATGGAGAAG CGAGTGCAGT TCGATCTGGA CTACATCCAT CGCTGGTCGC TGTGGTTTGA TCTGAAAATC GTCTTCCTGA CTATTTTCAA AGGATTTGTT GGAAAAAACG CGTATTAA
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Protein sequence | MMKEKSRIRI TNYHGKFFYR LIDSIFILVI MYISIKSNQH VVTMSYISVA LLGVLFYSYI AESLDIYSGW RTAKLRSLSL HTAFCWAATI ASLTLLAYFS KTGIEFSRMV MGAWFVGSFI GLIGWRVLAF ATIHYMHKKG LHTKNAVIIG MTTQGQELSN NLLKNPELGI VMQGFYDDRA PERLKEGAPV LGNINDALSL AKTGQVQNVY IALPMQAQRR INQILDAFSD STVNTYIVPD FFTFNLLHSR WYTIGDVNAF SIFDTPFNGL LNWVKRFEDL VLSSLILLLI SPVLLAVAIG VKLSSPGPII FKQNRYGLDG KPIQVWKFRS MRVMDNGSHV QQATKGDPRV TRFGAFIRRT SLDELPQFFN VLQGSMSIVG PRPHAVAHNE QYRTIVNRYM LRHKVKPGIT GWAQINGWRG ETDTLDKMEK RVQFDLDYIH RWSLWFDLKI VFLTIFKGFV GKNAY
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