Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0456 |
Symbol | |
ID | 5136196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 487394 |
End bp | 488710 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531914 |
Product | hypothetical protein |
Protein accession | YP_001216407 |
Protein GI | 147675069 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCGT TTCACAAAAC TCTATTTTTC GCTTTTTTAC TGTTTGTTTT CTGGTTACCA ATCCCTCTTG GCAGTAATCG TCCTTGGGCA TGGTCGCTCA ATGAAATTTA CGTAGCCTTC TTATTATTAG GCTGTTTGTT TCTGCTCCCC GCAGCACAGT GTTGGCTAGC TATACAACGA GCGAAAGTCA TTCTCATCCC AGTGGCGCTT TTTACTCTAT GGTCTTGGAT GCAAAGTTGG CCAAGTTTGG GGCTATCATC CGATCAAACT TTGGTGTTTA TCTCTGCCGT TAAATCCTTA CATTACCTAC AAATCTGCTT GGTTGCCGCG TTATTGGTCG ATACCCCTCA TAAGCTCAAA ATGCTGGCGA CCACTATGAT CGCAAGTGGT ATCTGTCAGG CCTTCTATGC TGGCGTAATC CTGCTGCTCG AATTGCAAAC CTCACCGTTT TTTTCCTTAC CGTTAAACCA ACGAGCCTCG GGAAGTTTTG TCTATCATAA CCATTTAGCC AATTTTCTAA TGCTCAATCT CTGTCTTGGT TTTGGTTTGT TGATTGCTGA GCTCAATCAC CAAACAACAC AAGGTTGGAG AAACACCCTA AAAAAATTAT TGGCGATACT CCTCTCTGAC AAAGCATTTA TTCGTCTGGG CTTGGTCATT ATGGTGATCG CTCTAGTACT CACCCGCTCA AGAATGGGCA ATATCGCCTT TTTTGTCGCA CTCAGTATCG GAAGCTTGCT CATCCTTCTC TTCTATAAAT CGAAGCCGAA AAGCCTCTAT CTGTTGATCG TGAGCTTATT TATTGTGGAT GCTTTGGTTG TCAGTAACTG GTTTGGCTTA GATAAGGTTC GCCAACGTTT AGCTGAAACC AGTTTGCAAA ATGAATCGCG GGATGATGTG GTTCGTGATG CCTTGAACGC CATTCAAGAA CGTCCCCTTA CCGGTTTTGG CAATGGCACG TTTTACTCCA CTTTCCCCTC TTACAATCAA GGCGAAGTGG CGCTTTTTTA TGACCATGCA CACAACGATT ATGTGCAGTT CACCTTGGAG TCAGGCCTGA TTGCCACCAG CGTATTTGGC ATCATGGTTT TGTTTTGTGC ATGGCGGGCT TTGTCAGCCT TTCGCAATCG AACCAATAAA ACTATGCGTG GCATTGGCCT TGGCAGTTTA ATGGCGATCA TCGGGATGCT GTTACACATG AGTGTGGATT TTCCACTGCA AGCCCCAGCC ACGGCGCTCT ACTTTCTATT TTGTCTATTA ATCGCCAATT GGAGCATGAC GCTTCCTACC CCGAAATACC GCTCATCCAG AACCTGA
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Protein sequence | MLSFHKTLFF AFLLFVFWLP IPLGSNRPWA WSLNEIYVAF LLLGCLFLLP AAQCWLAIQR AKVILIPVAL FTLWSWMQSW PSLGLSSDQT LVFISAVKSL HYLQICLVAA LLVDTPHKLK MLATTMIASG ICQAFYAGVI LLLELQTSPF FSLPLNQRAS GSFVYHNHLA NFLMLNLCLG FGLLIAELNH QTTQGWRNTL KKLLAILLSD KAFIRLGLVI MVIALVLTRS RMGNIAFFVA LSIGSLLILL FYKSKPKSLY LLIVSLFIVD ALVVSNWFGL DKVRQRLAET SLQNESRDDV VRDALNAIQE RPLTGFGNGT FYSTFPSYNQ GEVALFYDHA HNDYVQFTLE SGLIATSVFG IMVLFCAWRA LSAFRNRTNK TMRGIGLGSL MAIIGMLLHM SVDFPLQAPA TALYFLFCLL IANWSMTLPT PKYRSSRT
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