Gene VC0395_A0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0442 
SymbolwecC 
ID5136497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp471337 
End bp472578 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content48% 
IMG OID640531900 
ProductUDP-N-acetyl-D-mannosamine dehydrogenase 
Protein accessionYP_001216393 
Protein GI147674871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATA AAGTTTCAGT GATTGGCCTA GGTTATATTG GTCTGCCAAC AGCAGCCGTT 
TTGGCCTCTC GTGGTTTGGA TGTGGTCGGT GTTGATGTCA ACGCCCATGC AGTGGATACC
ATCAACAAAG GCGAGATTCA CATTGTGGAG CCGGATCTTG ATATCGTGGT ACGCAGTGCT
GTCATGACCG GGAAACTCAA AGCGACATTA ACAGCTGAGC CTGCCGATGC GTTTTTGGTG
GCCGTTCCTA CACCTTTTAA AGGGGATAAC CACGAACCTG ATCTTAGCTA CATTGAAGCG
GCGGCAAAAA CCATCGCTCC CGTTCTTGCT AAAGGGAACT TGGTGGTTCT AGAGAGTACT
TCCCCAGTAG GCACAACCGA AAAATTGGCG CAATGGCTTG CAGAAGCGCG TCCGGATCTG
ACGTTTCCTC AGCAAAAAGG CATCGCTGCG GATGTGAAGA TTGCGTACTG CCCAGAGCGT
GTGTTGCCGG GTTATGTCCT ACAAGAGCTT GTGAGTAATG ACCGCGTGAT TGGTGGCGTG
AGTAAGGCTT GTAGCGAAAA GGCTGTTGCC CTGTACAAAA CCTTTGTAAA AGGTGAGTGC
ATTGTCACCA ATGCGCGTAC GGCGGAAATG GCTAAATTAA CCGAAAACTC ATTCCGTGAT
GTCAACATTG CCTTTGCCAA TGAACTCTCT TTGGTGTGCA ACAAATTGAA AATCAATGTA
TGGGAATTGA TCCGCTTAGC CAACCGCCAT CCTCGTGTGA GTATTCTTAA CCCAGGTCCT
GGTGTCGGTG GCCACTGTAT TGCGGTTGAT CCGTGGTTTA TCGTTAATAG TTGTCCAGAT
GAAGCGCAAT TGATCCGTAC TGCACGTGAA GTCAATGATG GCAAACCTCA TTGGGTTGTG
GATCAAGTTA AACAAGCGGC TGACCAATTC AAAAAGCCAA TCATTGCTTG CCTAGGCTTA
GCGTTTAAAG CGGATATTGA TGATCTGCGT GAAAGTCCAG CCTTGGATAT CACTAAACAT
CTGGCTGAAA GCAAAGTGGG TCAGTTGTTG GCGGTTGAAC CAAATATTAC TGAACTACCT
AGCAAACTTG CGAAGCAAGG TATCGAGTTG GTTTCTCTAG AGCGCGCGCT TGAGCTCGCC
AATATCGTTG TCGTGCTGGT CGATCACAAA GAATTTAAAG CGGCGGATAA AACCGAGTTT
GCTAAGAAAG TGGTGATTGA TACTCGCGGA GTGGTGGCAT GA
 
Protein sequence
MFNKVSVIGL GYIGLPTAAV LASRGLDVVG VDVNAHAVDT INKGEIHIVE PDLDIVVRSA 
VMTGKLKATL TAEPADAFLV AVPTPFKGDN HEPDLSYIEA AAKTIAPVLA KGNLVVLEST
SPVGTTEKLA QWLAEARPDL TFPQQKGIAA DVKIAYCPER VLPGYVLQEL VSNDRVIGGV
SKACSEKAVA LYKTFVKGEC IVTNARTAEM AKLTENSFRD VNIAFANELS LVCNKLKINV
WELIRLANRH PRVSILNPGP GVGGHCIAVD PWFIVNSCPD EAQLIRTARE VNDGKPHWVV
DQVKQAADQF KKPIIACLGL AFKADIDDLR ESPALDITKH LAESKVGQLL AVEPNITELP
SKLAKQGIEL VSLERALELA NIVVVLVDHK EFKAADKTEF AKKVVIDTRG VVA