Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0438 |
Symbol | |
ID | 5135859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 464791 |
End bp | 465849 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640531896 |
Product | hypothetical protein |
Protein accession | YP_001216389 |
Protein GI | 147674519 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000466929 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA ACACTGTACT TTCATTGACC TTACTGACCC TGCTAATGAA CAGCGCTGTG CTATCGGCCA AAGAGCCGAA CCAGCCGCCC GCGATTTCTG TTGTGACAGA GTCGGTTCAA TCTCAGCAAA TTTCTCAATC TCTTTCTGTT GTGGGTAAGC TTAAAGCCGA GCAATCGGTC GACATTGCCG CTGAAGTGGC GGGTAAAGTG GACATGATTG CGGTGCAAGC CAATCAGCAA GTTAAAAAAG GTCAGATTCT GATCAAATTG GATGATGACA AAGCTCAAGC GGCCTTGGTG GAAGCTAAAG CTTATTTACA AGATGAGCAG CGTAAACTGA CGGAATACGA GCGCTTGCTA AAACGTAATG CGATTACGCC CACGGAAATT GATGCACAGC GCGCCCGAGT GGAGATTGGT CAAGCGAGAT TGAATGCCGC TCAGGCCAAT TTGGCCGATT TACACATTAC TGCTCCTTTT GATGGCACGG TTGGGTTTAT CGATTTTAGC CGCGGTAAGT GGGTGAGTGC GGGCTCTGAA TTACTGACGC TGGATAATCT TTCCTTGATG CGGCTCGACC TGCAAATTCC AGAACGTTAT CTGCCACAGT TAAGCAAGGG CATGAAGGTG CAAGGCAGTA GCGAAGCGTG GCCAAACGTG CAGTTTGAAG GTTCGGTGGT GGCTGTGGAT TCGCGTATCA ATCAAGAAAC CTTAAATTTA CGAGTGCGCG TGCATTTCCC CAATCCAGAT CAGCGCCTCA AGCCGGGCAT GTTGATGTCG GCACGCATCC ATTTCCCCGC TATTAGTGCG CCGATTATTC CTGTGCAGGC CCTTGAGTAC TCCGGCACCA AACGTTTTGT TTACGTGATT GGTGAAGACA ATGTAGCCAA ACGACGTGAA GTGAGCCTGG GCGCTCGGGT TGAAAATCAG GTCGTGATTG AGAAAGGCTT ACAGATTGGC GAGAAAATTG TCGTTCAAGG CATAGTCAAT ATGCGTGACA ACGCGCGTGT TAGCGAAGTC ACCGTAGAAG GGCGTCCGCT GAAGAAGGAT GACAAATAA
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Protein sequence | MNKNTVLSLT LLTLLMNSAV LSAKEPNQPP AISVVTESVQ SQQISQSLSV VGKLKAEQSV DIAAEVAGKV DMIAVQANQQ VKKGQILIKL DDDKAQAALV EAKAYLQDEQ RKLTEYERLL KRNAITPTEI DAQRARVEIG QARLNAAQAN LADLHITAPF DGTVGFIDFS RGKWVSAGSE LLTLDNLSLM RLDLQIPERY LPQLSKGMKV QGSSEAWPNV QFEGSVVAVD SRINQETLNL RVRVHFPNPD QRLKPGMLMS ARIHFPAISA PIIPVQALEY SGTKRFVYVI GEDNVAKRRE VSLGARVENQ VVIEKGLQIG EKIVVQGIVN MRDNARVSEV TVEGRPLKKD DK
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