| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0432 |
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| Symbol | treB |
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| ID | 5136633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 460530 |
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| End bp | 461966 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531890 |
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| Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
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| Protein accession | YP_001216387 |
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| Protein GI | 147675677 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00257211 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGAGG ATATGAGCAA GATAGCGAAA CAAGACGTGA CGCGTCTTAT CGAATTGGTG
GGAGGCGAAA GCAATATTGC GAGCGTTACT CACTGTTTGA CACGCTTACG CTTTGTGCTG
AATCAGCCAG AGCAGGCTGA CAAGGCGGGT TTGGAAGCGC TGAGCATGGT AAAGGGCTGC
TTTACCAATG CGGGGCAATT TCAGGTAGTC ATTGGCACTG AAGTTGATCA AGTGTACAAA
ATGCTGCTGG AACAAACCGG GAAACAAGCC GTTTCCAAAG ACGATGCCAA AGTCGCAGCG
CGTCAAAACA TGAATGTGCT AGAGCGTGGT ATTTCCCATT TGGCTGAAAT TTTTGTGCCA
CTGCTGCCTG CGATCATCAC CGGTGGTTTG ATCCTCGGTT TTCGTAATGT GATAGGTGAC
ATTCGCATGT TTGATGGCAA AACGCTGACT GAAATCAGTC AGTTTTGGGC ATCGGTTCAT
GCGTTCTTGT GGCTGATTGG CGAAGCGATT TTCTTCTTCT TACCTGTCGG TGTCTGCTGG
TCAACCGTGA AAAAACTTGG CGGTACCCCA ATCCTCGGTA TTACCCTTGG GGTAACACAG
GTTTCTCCGC AATTGATGAA CGCTTACCTG ATCGGTAAAG AAGTGCCAGA AGTATGGGAT
TTCGGGCTGT TTGCGATTGA AAAAGTGGGT TACCAAGCTC AGGTTATCCC CGCTATCTTG
GCTGGTGTGG CATTAGCCTT TATTGAAAAT AATTTAAGAC GTGTGGTGCC TTCTTACCTC
TATCTGGTAG TGGTGCCGTT TGTATCAATC ATTGTGTCAG TGGTGCTTGC TCACGCCTTC
ATCGGCCCAT TTGGTCGCGT GATTGGTGAT GGTGTGGCAT TTGCAGCGAA AGCGGCAATG
ACGGGTGATT TCGCGGTGAT TGGTTCGACG CTGTTTGGCT TCATGTATGC TCCTCTCGTG
ATTACCGGCA TTCACCACAC CACTAACGCG GTGGATCTGC AGCTGATGCA AGAGCTTGGT
GGTACGCCGA TTTGGCCATT GATCGCGCTA TCTAACATTG CGCAAGCATC GGCAGTAGTG
GGCATCATTA TCATCAGTAA AAAGCAGGGC GAACGGGACA TTTCTGTACC GGCGGCGATT
TCCGCTTACC TTGGTGTAAC TGAACCTGCG ATGTACGGTA TCAACCTTAA ATACAAATTC
CCTATGCTGA GCGCAATGAT CGGCAGTGCT TTGGCTGCCG CAGTCTGTGG TAGCGCAGGT
GTAATGGCCA ATGGTATCGG TGTCGGCGGC TTGCCGGGTA TTCTCTCGAT TCAGCCGCAG
TTTTGGAGTA TTTACCTCGT CGCCATGCTA ATTGCGATTT TGGTACCCGC AGCATTGACT
CTGCTGATGT ACAAGCGCGC ACAGAGTTCA GGCAAACTGG CCGTTTCGGC TGCCTAA
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| Protein sequence | MDEDMSKIAK QDVTRLIELV GGESNIASVT HCLTRLRFVL NQPEQADKAG LEALSMVKGC
FTNAGQFQVV IGTEVDQVYK MLLEQTGKQA VSKDDAKVAA RQNMNVLERG ISHLAEIFVP
LLPAIITGGL ILGFRNVIGD IRMFDGKTLT EISQFWASVH AFLWLIGEAI FFFLPVGVCW
STVKKLGGTP ILGITLGVTQ VSPQLMNAYL IGKEVPEVWD FGLFAIEKVG YQAQVIPAIL
AGVALAFIEN NLRRVVPSYL YLVVVPFVSI IVSVVLAHAF IGPFGRVIGD GVAFAAKAAM
TGDFAVIGST LFGFMYAPLV ITGIHHTTNA VDLQLMQELG GTPIWPLIAL SNIAQASAVV
GIIIISKKQG ERDISVPAAI SAYLGVTEPA MYGINLKYKF PMLSAMIGSA LAAAVCGSAG
VMANGIGVGG LPGILSIQPQ FWSIYLVAML IAILVPAALT LLMYKRAQSS GKLAVSAA
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