| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0417 |
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| Symbol | thiI |
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| ID | 5135323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 443586 |
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| End bp | 445133 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531875 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_001216372 |
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| Protein GI | 147673207 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000383743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGTGT ATAATCGCGC CCCTTTAGCG GTAAGCGCCT TGCCAAGGTT TACCTGCTGC
TCGCCAGATT GTCTAACTCA GATTGCGAAT AACTGTATGA AATTTATCGT TAAACCCCAT
CCGGAAATTT TTGTGAAAAG TGAATCGGTA CGTAAGCGTT TCACAAAGAT CCTTGAGAGC
AATATTCGAA TTATTGTGAA AGCCCGCACA CAAGGGGTGG CGGTATTCAA TCGTCGTGAT
CATATTGAAG TGACGTCAAA CAGCGATACT TATTACGCCG AAGTGTTGGA GATTCTGACG
ACCACACCGG GTATCCAGCA AGTGTTGGAA GTGCAGCAAT CAAGCTTTAC CGATCTGCAC
AACATCTACG AGCAAGTGCT GGAGCTAAAT CGCGCTAACC TCGAAAACAA AACCTTTGTT
GTGCGCGCGA AACGCCGTGG TAAGCATGAT TTTACCTCTA TTGAACTCGA ACGTTATGTT
GGGGGTGGCC TCAATCAAGC CATCGCCAGT GCCAAGGTAA AATTGATTAA CCCTGACGTG
ACCGTGCAAG TGGAAGTGGT CGATGAGCTG CTTAACCAAG TGATCGCGCG TCATAAAGGT
TTAGGTGGTT TCCCTCTGGG GACCCAAGAA GATGTATTGA GCCTGATTTC TGGTGGCTTC
GACTCCGGTG TGTCGAGCTA TCTGCACATT AAACGTGGTT CAAAAGTGCA TTACTGCTTC
TTTAATCTGG GGGGACCCGC CCACGAAATT GGTGTGAAGC AAACCGCTTA CTACCTGTGG
CAAAAATACG GTTCATCGGC CAAAGTGCGA TTTATCGCGA TCGATTTTGC TCCTGTGGTG
GCTGAGATCC TCGAGAAGAT CGATGATGGT CAAATGGGCG TGGTGCTCAA GCGTATGTTT
ATGCGCACCG CCGGTATGGT GGCTGAGAAG TTTGGCATTC AAGCTTTGGT TACGGGTGAA
GCGCTAGGCC AGGTTTCTAG CCAAACCCTG ACTAACCTGC GCCATATCGA TAACGTGACC
GATACTTTGA TTCTGCGTCC GCTCATCAAC TGGGATAAAG AAGACATCAT CCGTCTGGCG
CGTGAAATTG GTACGGAAGA TTTCGCCAAA ACCATGCCTG AATTCTGCGG GGTGATTTCA
AAAAGCCCAA CCGTAAAAGC GGTAAAAGAG AAATTGGAAG AAGAAGAAGC CAAATTCGAT
TTTGCTCTGC TTGATCAAGT GGTGTACAAC GCGCGCCAAA TCGACATTCG TGATATTGGT
AAAGAGTCGC TGGAAAAAGC CCCTGAAGTG GAGTTGGTTA ACAGCGCAGA AGAGGGTAAC
GCCGTCGTAC TGGATATTCG TAGCCCAGAC GAAGAGGACG AAAGCCCGCT AGAGATTGCG
GGTGTGGAAG TGAAGCATCT GCCTTTCTAT AAGCTTGCGA CTCAATTTTG TGACCTCGAT
CAGTCAAAAA CCTACTTGCT GTACTGCTCA CGTGGCGTGA TGAGCCGCTT ACAAGCGCTG
TACCTGCAAG AACAAGGGTT TAACAATGTG AAAGTTTATC GTCCATAG
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| Protein sequence | MIVYNRAPLA VSALPRFTCC SPDCLTQIAN NCMKFIVKPH PEIFVKSESV RKRFTKILES
NIRIIVKART QGVAVFNRRD HIEVTSNSDT YYAEVLEILT TTPGIQQVLE VQQSSFTDLH
NIYEQVLELN RANLENKTFV VRAKRRGKHD FTSIELERYV GGGLNQAIAS AKVKLINPDV
TVQVEVVDEL LNQVIARHKG LGGFPLGTQE DVLSLISGGF DSGVSSYLHI KRGSKVHYCF
FNLGGPAHEI GVKQTAYYLW QKYGSSAKVR FIAIDFAPVV AEILEKIDDG QMGVVLKRMF
MRTAGMVAEK FGIQALVTGE ALGQVSSQTL TNLRHIDNVT DTLILRPLIN WDKEDIIRLA
REIGTEDFAK TMPEFCGVIS KSPTVKAVKE KLEEEEAKFD FALLDQVVYN ARQIDIRDIG
KESLEKAPEV ELVNSAEEGN AVVLDIRSPD EEDESPLEIA GVEVKHLPFY KLATQFCDLD
QSKTYLLYCS RGVMSRLQAL YLQEQGFNNV KVYRP
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