Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0402 |
Symbol | rpmE2 |
ID | 5136187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 431365 |
End bp | 431622 |
Gene Length | 258 bp |
Protein Length | 85 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531860 |
Product | 50S ribosomal protein L31 type B |
Protein accession | YP_001216357 |
Protein GI | 147673049 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0254] Ribosomal protein L31 |
TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000000944485 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAG GCATTCATCC CGATTACCGT AAAGTGGTGT TCCACGATAC CACGGTTGAT CACTATTTTG TAGTTGGTTC TACTTTGCAA ACCGATCGCA CTATTGAGTG GGAAGGCAAA ACTTACCCCT ACATTACCAT CGAGGTTTCG TCAGAATCTC ACCCGTTCTA TACCGGTAAA CAACGTGTGG TACAAAAAGA AGGTCGCGTT GCGAACTTCA CTCGTCGTTT CGGTCAGTTT GCTAAGGAGT CAAAATGA
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Protein sequence | MKAGIHPDYR KVVFHDTTVD HYFVVGSTLQ TDRTIEWEGK TYPYITIEVS SESHPFYTGK QRVVQKEGRV ANFTRRFGQF AKESK
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