Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0400 |
Symbol | proS |
ID | 5136386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 428594 |
End bp | 430309 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640531858 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_001216355 |
Protein GI | 147673158 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0189539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACCA GTAACTATCT TCTTTCCACT CTGAAGGAGA CTCCAAACGA CGCAGAAGTT GTGAGCCATA AGCTCATGCT CCGTGCAGGT ATGATCCGTA AGCTGGCTTC AGGTCTCTAT ACTTGGCTGC CTACTGGTCT GCGTGTACTG CGTAAAGTCG AAAACATCGT TCGCCAAGAG ATCGATAATG CCGGTGCAAT CGAAACCTTG ATGCCGGTGG TGCAGCCGTT TGAATTGTGG GAAGAGACTG GTCGCTCTGA AAAAATGGGC CCAGAGCTAC TGCGCTTTAC TGACCGCCAT GAGCGTCCGT TTGTTTTAAG CCCAACTGCG GAAGAAGTGA TCACGGCGCT GGTGCGTAAT GAGGTGAGCT CTTACAAGCA GTTGCCACTG AACTTGTATC AAATTCAAAC CAAATTCCGT GATGAACGCC GTCCACGTTT TGGTGTGATG CGTGCCCGTG AATTCTGCAT GATGGATGCG TACAGCTTTG ATATCGACAA AGCGGGCCTA GAAAAATCCT ACGAAGCCAT GCACGTTGCG TATTGCAAAG CGTTTGACCG TATGGGCCTC GATTACCGCC CAGTGCTAGC GGATACTGGT GCTATCGGTG GTAACGGCTC ACACGAATTC CACGTACTGG CAGAAAGTGG CGAAGATCTG ATCGCCTTCT CAACCGAATC GGATTACGCA GCCAACATCG AAAAAGCCGA AGCGGTTGCA CCGGCGATTG AGCGCCCAGC GCCTACGCAA GCGATGACCT TGGTTGATAC CCCTAACGCA AAAACCATCG CAGAATTGGT TGAGCAGCAC GGTCTGCCTA TCGAAAAAAC GGTGAAAACC TTATTTGTCA AAGCCTCAGA TGAAATCGAT GCGCCTATCG TTGCGCTGAT CATCCGTGGT GACCATGAAC TGAACGAAAT CAAAGCCGAG AAACTGGCCG AAGTGGCCTC GCCGCTGGAA ATGGCCAGCG AAGAAGAGAT TCGCGCGCTG ATCGGTGCAG GCCCTGGCTC ATTAGGCCCT GTCGGCCTGA AACTGCCATT TATTGTTGAC CGCACCGTTG CTGTGATGAA CGATTTCGGC GCTGGCGCAA ACATCGATGG TAAACACTAC TTCGGTATCA ACTGGGGTCG TGATGTTGAA CTGGGTAAAG TCGAAGATCT GCGTAATGTG GTTGAAGGCG ATCCAAGCCC ATGTGGCAAA GGCACACTGA TGCTCAAGCG CGGTATCGAA GTGGGTCACA TCTTCCAATT GGGTACCAAC TACTCTGAAA AGATGAACTG TGGCGTACTC GATTCGAACG GTAAAAACGT CATTCTTGAG ATGGGTTGCT ACGGTATCGG CGTCTCTCGC GTCGTCGCGG CAGCCATCGA ACAAAACCAT GACGATTACG GCATCATTTG GCCTGATGCG ATTGCACCTT TCCAAGTGGC TATTGTGCCG ATGAACATGC ACAAATCTGA GCGTGTTCAG CAAGCCGCTG AAAAATTGTA TGCAGAATTG ACAGCTGCAG GCATCGAAGT GCTGTTTGAT GATCGTAAAG AGCGTCCGGG CGTCATGTTC TCAGATATGG AGCTGATCGG CGTGCCACAC ACCATCATCA TTGGTGATCG CAGCATGGAT GAAGGCCACT TCGAATACAA AAATCGCCGT CAAGGTGAGA AAGAAGCCGT GGCAATGGAG TCAATCATCG ACTTTATCCA AGCCAAACTG GCCTAA
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Protein sequence | MRTSNYLLST LKETPNDAEV VSHKLMLRAG MIRKLASGLY TWLPTGLRVL RKVENIVRQE IDNAGAIETL MPVVQPFELW EETGRSEKMG PELLRFTDRH ERPFVLSPTA EEVITALVRN EVSSYKQLPL NLYQIQTKFR DERRPRFGVM RAREFCMMDA YSFDIDKAGL EKSYEAMHVA YCKAFDRMGL DYRPVLADTG AIGGNGSHEF HVLAESGEDL IAFSTESDYA ANIEKAEAVA PAIERPAPTQ AMTLVDTPNA KTIAELVEQH GLPIEKTVKT LFVKASDEID APIVALIIRG DHELNEIKAE KLAEVASPLE MASEEEIRAL IGAGPGSLGP VGLKLPFIVD RTVAVMNDFG AGANIDGKHY FGINWGRDVE LGKVEDLRNV VEGDPSPCGK GTLMLKRGIE VGHIFQLGTN YSEKMNCGVL DSNGKNVILE MGCYGIGVSR VVAAAIEQNH DDYGIIWPDA IAPFQVAIVP MNMHKSERVQ QAAEKLYAEL TAAGIEVLFD DRKERPGVMF SDMELIGVPH TIIIGDRSMD EGHFEYKNRR QGEKEAVAME SIIDFIQAKL A
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