| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0378 |
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| Symbol | recN |
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| ID | 5136443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 407474 |
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| End bp | 409138 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531836 |
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| Product | recombination and repair protein |
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| Protein accession | YP_001216333 |
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| Protein GI | 147673817 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.116911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCTC ACTTAAGTAT CAATAACTTC GCTATCGTAA AGTCACTACA ACTCGAATTA
TCAAAAGGAA TGACCACCAT CACCGGTGAA ACTGGTGCTG GTAAATCCAT TGCGATTGAT
GCTTTAGGTT TATGTCTCGG TGGTCGAGCC GAAGCCAGCA TGGTGCGTCA AGGTGAAGAT
AAAACCGAAG TCAGCGCCGC CTTTCATCTG GATAACAATC TGCTCGCTAG CCGTTGGTTA
GAAGATAATG AACTGCTTGA AGGCAAAGAG TGCATTCTGC GCCGAATCAT CACCAAAGAT
GGGCGCTCTA AAGCCTTTAT TAATGGCAGC CCAGTTCCGC TCTCTCAACT CAAAACATTG
GGGCAACTGC TGATCAATGT GCATGGTCAA CACGCACATC AGCAACTGAT GAAACCGGAA
TATCAGCTCA GCATGCTTGA TCAATACGCA GGTCATGCAG ACTTGCTCAA AGCCACGCGT
CACGCCTATC AAAATTGGCG TCAAGCGAGC AATCAGCTCA AACAGCTGCG CGAAAATAGC
CAACAAAATC AGGCACAATT ACAACTTTTG GAATACCAAA TCAAAGAGCT CAACGAATTG
GCTCTCGGTG AGGATGAGTT TGTCGAGCTA GAACAAGAGC AAAAACGCTT AGCCAATAGC
GGCGATCTGG CACTCAACTG CCAACGCGCG ATTGAACTGC TCAATGAAGG GGAAGAAGTA
AACGCCTTAG GCCTTTTACA AAGTGTTAGC CATACGCTGA TTGATCTGGC TGAAATGGAT
AGCAAACTGA CAGCGCTCCC TTCAATGGTG GCCGAAGCGC TGATCCAACT TGAAGAGACT
TACCATGAAC TGCGCAATTA CTTGGATTCG ATTGATGTCG ACCCAGAACG CATGGCGTAT
GTAGAAGAGC GCTACTCCAA AGTCATGTCG CTCGCGCGTA AACATCATGT ACTGCCAGAA
GAGCTGTATC AGCATCACCA AGCACTCTTA CAGCAAATTG CTCAGCTAGA TTGTTCTGAT
GAGAAAATGT CAGCACTCGC GAGTGAAGTC GACGTGCTCT ACCAAACGTT TGTTGCGGCC
GCTGACAAAC TGCACAAATC TCGTGTTCGC TATGCCAAAG AATTGGATAA ATTGATTAGC
CAAAGCATGC ATGAGCTGAG CATGGAAAAA GCGCAATTCA AAATCGAAGT GCAGCAAGAC
AGCGCGCACT CATCGCCATT AGGTTTTGAT GCCGTGACTT TCTTAGTCTC GACGAACCCG
GGTCAACCGC TGCAACCCAT CGCCAAAGTG GCCTCTGGTG GTGAACTGTC ACGGATGTCA
TTGGCGATCC AAGTGATTAC TGCGCAGAAA GTCGATACTC CAAGCCTGAT TTTTGATGAA
GTTGACGTGG GTATTTCAGG GCCAACAGCA GCCGTAGTTG GCAAACTACT GCGCAAATTG
GGCGAGTCGA CTCAAGTACT GTGTGTCACC CACTTACCGC AAGTGGCAGG TTGCGGACAC
CATCAACTGT TTGTCGCCAA ACAGACCAAA GCAGGCAAAA CCGAAACGCA AATGCTCAAA
CTGGATCAAG AACAGCGCAT TGCTGAACTT GCACGCTTGC TCGGAGGCAG CCAAATTACC
GAATCCACGC TCGCGAATGC TAAAGAGCTA TTAATCGCAG CCTAA
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| Protein sequence | MLAHLSINNF AIVKSLQLEL SKGMTTITGE TGAGKSIAID ALGLCLGGRA EASMVRQGED
KTEVSAAFHL DNNLLASRWL EDNELLEGKE CILRRIITKD GRSKAFINGS PVPLSQLKTL
GQLLINVHGQ HAHQQLMKPE YQLSMLDQYA GHADLLKATR HAYQNWRQAS NQLKQLRENS
QQNQAQLQLL EYQIKELNEL ALGEDEFVEL EQEQKRLANS GDLALNCQRA IELLNEGEEV
NALGLLQSVS HTLIDLAEMD SKLTALPSMV AEALIQLEET YHELRNYLDS IDVDPERMAY
VEERYSKVMS LARKHHVLPE ELYQHHQALL QQIAQLDCSD EKMSALASEV DVLYQTFVAA
ADKLHKSRVR YAKELDKLIS QSMHELSMEK AQFKIEVQQD SAHSSPLGFD AVTFLVSTNP
GQPLQPIAKV ASGGELSRMS LAIQVITAQK VDTPSLIFDE VDVGISGPTA AVVGKLLRKL
GESTQVLCVT HLPQVAGCGH HQLFVAKQTK AGKTETQMLK LDQEQRIAEL ARLLGGSQIT
ESTLANAKEL LIAA
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