Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0374 |
Symbol | smpB |
ID | 5137141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 405467 |
End bp | 405952 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531832 |
Product | SsrA-binding protein |
Protein accession | YP_001216329 |
Protein GI | 147675473 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA AGAAAACCAA TACCAAAGCG GGTAGCAACA CTATCGCGCT GAACAAAAAA GCTCGCCACG AATACTTCAT CGAAGATGAA TTTGAAGCCG GCATGGAGCT ACAAGGCTGG GAAGTCAAAT CACTTCGCCA AGGTAAAGCC AACATTGCAG AAAGCTACGT CTACATCAAA GATGGCGAAG CGTTCATTTC CGGTATGACC ATCATTCCGT TGCAGCAAGC CTCCACTCAC GTGGTAGCCA ACCCTACCCG TATCCGCAAG CTGCTACTTT CACGCCGCGA GCTGGACAAC CTGTTTGGCC GCATCAACCG TGAAGGGATG ACACTAACCG CATTGTCACT CTACTGGTCT CGTTCGTGGG TCAAAATCAA AATTGGCGTT GCGAAAGGTA AGAAACTGCA CGACAAACGT GAAGATCTGA AAGAAAAAGA GTGGCAACGC CAAAAAGATC GAGTGATGAA GAGCGCGTTG CGCTAA
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Protein sequence | MTKKKTNTKA GSNTIALNKK ARHEYFIEDE FEAGMELQGW EVKSLRQGKA NIAESYVYIK DGEAFISGMT IIPLQQASTH VVANPTRIRK LLLSRRELDN LFGRINREGM TLTALSLYWS RSWVKIKIGV AKGKKLHDKR EDLKEKEWQR QKDRVMKSAL R
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