| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0372 |
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| Symbol | |
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| ID | 5137310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 403597 |
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| End bp | 404865 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640531830 |
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| Product | phage family integrase |
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| Protein accession | YP_001216328 |
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| Protein GI | 147674820 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA ACACAGTAAA GCTGACAGAT AAAGAGATCA AAGCCTCCAA ACCTAGAGAG
AAAGAATATA ATCTTTTCGA TGGTGATGGC TTGCGACTTA GAATCAAACC TAACGGTTCA
AAGCAGTGGA TCTTCAACTA CTATCGCCCC ACAAACGGTA AACGAGCTAA CTTAAGCTTT
GGAATGTACC CAGACATCTC CCTTTTACAA GCAAGAAAAA GCTTACTTTC TGCCAAAGAG
CTGATCGCAC AAGGCATCGA TCCACAAGAC GATCGAAAAC GCCAACAACA AGTACATAAA
GAGATCCATG AGCACACCTT TGAGAACGTC ACAAAGGATT GGTTTGCCAT CAAACAGAAT
GATGTGACAC CGGATTACGC CCTTGATATC TGGCGTTCAT TAGAGCTACA TATCTTCCCG
CACATTTCCG ACAAACCGGT AAAAGCGATC ACCGCTCCGG AGATCATAGA ACTACTCAAA
CCGATTGAAG CCAAAGGTAG CCTAGAAACC GTCAAACGTT TAACACAGCG ACTCAATGAA
GTGATGAACT TCGCCACTAA CTGCGGTCTT ATCCAGGCCA ATCCATTAAC TGGCATCAAA
GCCGCCTTCA AGAAACCAAA AAAAGAAAAC ATGGCAGCAC TGACACCAGC AGAACTGCCC
GAACTCATGA GCGCAATCGC TAATGCCAGT ATCAAACGCA CTACCCGTTG TTTACTTGAG
TGGCAACTAC ACACCATGAC GCGCCCAGCG GAAGCATCTG GTGCACGTTG GGATGAAATT
AATTGGGAAG AAAAGGTTTG GACCATTCCT GCTGAAAGAA TGAAAAAAAG AAGAGAACAC
CGCATCCCGC TCACAGAGCA GATGCTGGCG CTATTGGAAG TAATGAAACC GATAAGTGGC
CATCGTGATT TTATTTTTCC GTCGGATAGA GCCCCGAAAA AGCCCTGCAA CAGCCAAACG
GCAAATATGG CATTGAAACG TATGGGGTTT GCTGGAAGGC TGGTTAGTCA CGGTTTGCGC
TCTCTAGCGA GTACCACACT CAACGAACAA GGCTTTGATC CAGACTTGGT TGAGTCGGCA
TTGGCTCACG TGGACGATAA CCAAGTACGC AGTGCCTATA ACCGCACTGA CTACTTAGAA
CGCAGAAAAC CAATGATGTG CTGGTGGAGC GAGCATATAG AAGAGGCAGC CAGAGGTAGC
CTATCTGTGA CTGGTACAAA GCAATTGAAA AATAAACTTC CACCGCCCCC CACATGGAAG
CAGATGTGA
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| Protein sequence | MAKNTVKLTD KEIKASKPRE KEYNLFDGDG LRLRIKPNGS KQWIFNYYRP TNGKRANLSF
GMYPDISLLQ ARKSLLSAKE LIAQGIDPQD DRKRQQQVHK EIHEHTFENV TKDWFAIKQN
DVTPDYALDI WRSLELHIFP HISDKPVKAI TAPEIIELLK PIEAKGSLET VKRLTQRLNE
VMNFATNCGL IQANPLTGIK AAFKKPKKEN MAALTPAELP ELMSAIANAS IKRTTRCLLE
WQLHTMTRPA EASGARWDEI NWEEKVWTIP AERMKKRREH RIPLTEQMLA LLEVMKPISG
HRDFIFPSDR APKKPCNSQT ANMALKRMGF AGRLVSHGLR SLASTTLNEQ GFDPDLVESA
LAHVDDNQVR SAYNRTDYLE RRKPMMCWWS EHIEEAARGS LSVTGTKQLK NKLPPPPTWK
QM
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