| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0345 |
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| Symbol | tagA |
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| ID | 5136657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 367697 |
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| End bp | 370738 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640531803 |
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| Product | ToxR-activated gene A protein |
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| Protein accession | YP_001216301 |
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| Protein GI | 147675654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTT CGAAAAATGT TTACGAGGAG TTAGTGGTGG TAAGATATTC ACTCTTAATG
AAAGTTTCTT TTGCAATACT TATTTTCTTA GTTGGATGTA ATGAGAATGC AACATCCAGT
AACGACCAGT ATTTGACTGA TCCTGATATA AGTGAACAAA CAAAGAAGCC ATCAAGGCCT
ATAATTGATG AAAAAAATAA AGGTGTAACA GATACTTCGG TTACAATAGA ATGGGATAAG
ATTGAGTGTG AAAAAAATTT TAGTCATTAT AATGTAATTG TCTATAGAAA AGATCGAATA
GAAGATGTAA TAACTATCAG AACTAGGAAT AATAGTGTTT TTATCGATGA TTTAAAACCT
AACAGCCAGT ATTCTATAGA TGTCTCAAGT TGTTTACACT CTGCTTGTTC AGAAAGCGCA
AAAATAGAAT TCATTACGTT GAACGAGATA GATTATTATC ACACCACAGA AATAGAAAAA
AATGTGTATG GAAGCTTGGA AGGTGAAGTT AGATTTGTGC AAACGCATGT CATTTCTCCT
GAGGGTAGAA AGAATGAGCC TGAAATAATC ACAGGAAGAG ATGCATTAAT ATTGTTTAAG
CCATCAATAA AAAACTCAAG TTCAATTTTG ATGAAAATTT ATTCAGAAGA TGGACTCACT
AGCAAAGTTG TAATGAAATC ACCATCTATG TTGCCAAAAA CTGATCAACC AATAGATATT
GATGAAAATA ATAAAGTTGT AAGTTACTCT AACTCATATT GGAGTGCAGA GATACCATGG
AATAAAATGA AAAGTGGTAT GTCATTACAT TTTGAAGACG AAAACGGCAA CTTAGGTATT
ATTGAGTCAG AACGTATAAA ATTTTCAGCA CCTAGTGAAT TGATTATTCA AAATATAGAT
CTTGGAATGT TATATAAACC AAGAGGAAGA AATATCGTAA TAAAAGAATT GGAAAGAACA
GCCGTTGATT ACTTTCAGAA AGTTCCTGTC TCAAAGTTGA TTTTTTCAGA TTATACCCCT
ATTCATTTTG AAAAAATAAC ATTACCAAAT GGTTCAGTAT ATACTGAGAA AAGTGCTGAT
ATAGGTGGAT GGCATCAAGG TGATATGAGA GAAGCAGTAG GGAAAGCACT AGTATCTACC
GGAATAAATA ATGCTAATTT AGGTATAGTT GCCTCGTCAG GATATTCTCA ACAATACAAC
AGATTAACGA ATCATATTAC CGCACACACA AATATTGGAT ATTATAACAA TGGAGTGGTT
GTGCATGGAG GGAGTGGTGG TGGTGGGATC GTTACACTAG AAAATACACT TCATAACGAA
TGGTCTCATG AATTGGGACA TAACTATGGA TTGGGACATT ATGTTGCAGG TGGTACTAGT
CATGGACCTG ATACTTCATG GGGTTGGGAT GGCTATTATA AAAGATTCAT AGCTAACTTT
GATTGGAAAC GTTCACCACA ATCAAATATA AGGCCAGATA ATCAAGAAGT TGTTAAGCCC
TTCATGGACA AGTATACATA TCTTTGGGAT GCAATGTCTG GAGGATATGA CCATCAAAAT
GGAATCATTA GTAGATATAC ACTTCATCAT CCATATGTTG CAAGAATTAT CCAAGATTGG
CTTAAAAATG GGGCTGTTGT AATAAATAAT GATTATATGG TTTGGGATGA ATTAAAAAAT
ATCTATGTGT ATAAGGGAAC GAACTTCAAA GTTCCAATAA AAAAAGGTGT ACCTGTTGTG
ACGATATTAG GGGTTTATGA TCCTGACAAA ATTAATCCAA GTCAATTGTA TCCTCCGACA
TACAGCAATT ATGGAAATAT ATTCGATTTA GAAAAACCTC GTTCAGAATC ATCCTTAAAA
GGGTGGCAAT ATGTTAAAGA TGTCAACTAT CTAGATAGAG TTAATACACA TTGGCATACG
ATGCTCGTAA ATAGAAAAGA AGAAAAAATA TGTCGATTTT CTTATCTAAG CCCTAAAGGT
AAAAAATTTG AATTTCTAGG GTATGAAGAC ATTGAGAATA AAATATGCAC AGGAAGTAGA
AGTATTCACT ATTTAGAAGA CGGCAAGAAA AATCCAATAG AATCCAAGTA TAATGATTAT
TTTTTATTAT CAATAGATGG TGATGGAGAA ATAAGTTATG TTCCTGATTC TACTATTGGT
GAAAGTAAAA TATGTTCACT AAAGATGTCT GGTACTGTAT ACGGTGCAGG TTTTATTAAA
GGAAACTCTT GTCGGCAAAT TGACGGTGTT TTTATGAACG GATTTCAATG GGCTTTTACA
TTAAATCAAT CAGGAGTAAA TAGTACCTAT ACATGGTCAA ATGAATGTGT ATTAAAAATT
AAAGATAAAG ATAATAATAT TGAATCAATA TCGATACCAA ATTATAGAAT AGAAAAAAAT
CAGAGTAATA AAATTCATCT TAATATAAGC AGAGAAAAGC CCATAATAGA TATTAACGTG
TATTGTGGAG AACATGAGTT AACTAGCATA AAGGTTTCTG ATAATCCTGA TATAAAATTA
CTAAAAGGAC CTATTATTGT TGGGCAAGAG CATGGTTACA CAAGCTATGA GCCTAAGCTT
CCTAGTGGTT GGTTCAAACA TTATGACAAT TTTGAACCCA AAAATGAAAT CAACCATGAA
TTAGGAAAGA TGCGTGTAAA TGATAATGAT GAATATATTT GTCGATTTAA TTTTTCTGAT
TCAGATAGGG AAATGAAATT TGTTGGTTAT GTGAGTCAAT TATCTGAAAG TAAGTACATT
TGTACTGGTG GAAGTGAGAT CTATTACAAG AAAAACGACA TTAATATTGA ACTATCATCA
AAAGAAAACG ATTTTGAATG GTTATCAGTA AGAGATAAAA ATTTGATAGG TTCAAAAATA
GAATTTGATA ACAATAAGAC ATTGTGCGTA TTAGATAATA GATCATTTTA TGGTGCTGGT
TACCTCGATG AAAACAATAG ATGTACACAA GATAGACAAA TTCATTGGTC TAATGGTAAA
CAATGGTTAT TTAGTACTTA TAAAACGATG ACCTACCATT AA
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| Protein sequence | MIFSKNVYEE LVVVRYSLLM KVSFAILIFL VGCNENATSS NDQYLTDPDI SEQTKKPSRP
IIDEKNKGVT DTSVTIEWDK IECEKNFSHY NVIVYRKDRI EDVITIRTRN NSVFIDDLKP
NSQYSIDVSS CLHSACSESA KIEFITLNEI DYYHTTEIEK NVYGSLEGEV RFVQTHVISP
EGRKNEPEII TGRDALILFK PSIKNSSSIL MKIYSEDGLT SKVVMKSPSM LPKTDQPIDI
DENNKVVSYS NSYWSAEIPW NKMKSGMSLH FEDENGNLGI IESERIKFSA PSELIIQNID
LGMLYKPRGR NIVIKELERT AVDYFQKVPV SKLIFSDYTP IHFEKITLPN GSVYTEKSAD
IGGWHQGDMR EAVGKALVST GINNANLGIV ASSGYSQQYN RLTNHITAHT NIGYYNNGVV
VHGGSGGGGI VTLENTLHNE WSHELGHNYG LGHYVAGGTS HGPDTSWGWD GYYKRFIANF
DWKRSPQSNI RPDNQEVVKP FMDKYTYLWD AMSGGYDHQN GIISRYTLHH PYVARIIQDW
LKNGAVVINN DYMVWDELKN IYVYKGTNFK VPIKKGVPVV TILGVYDPDK INPSQLYPPT
YSNYGNIFDL EKPRSESSLK GWQYVKDVNY LDRVNTHWHT MLVNRKEEKI CRFSYLSPKG
KKFEFLGYED IENKICTGSR SIHYLEDGKK NPIESKYNDY FLLSIDGDGE ISYVPDSTIG
ESKICSLKMS GTVYGAGFIK GNSCRQIDGV FMNGFQWAFT LNQSGVNSTY TWSNECVLKI
KDKDNNIESI SIPNYRIEKN QSNKIHLNIS REKPIIDINV YCGEHELTSI KVSDNPDIKL
LKGPIIVGQE HGYTSYEPKL PSGWFKHYDN FEPKNEINHE LGKMRVNDND EYICRFNFSD
SDREMKFVGY VSQLSESKYI CTGGSEIYYK KNDINIELSS KENDFEWLSV RDKNLIGSKI
EFDNNKTLCV LDNRSFYGAG YLDENNRCTQ DRQIHWSNGK QWLFSTYKTM TYH
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