| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0318 |
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| Symbol | citA |
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| ID | 5137278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 337010 |
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| End bp | 338707 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531776 |
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| Product | sensor kinase citA |
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| Protein accession | YP_001216274 |
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| Protein GI | 147673181 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAT CCCTCACGCA ATTTTTACAC ACCAAGGTCT GCCAGACGCT TTCGTTTCAA
CAGAGGGTTG GCGCTCTTTT GGTGGCTATG GTGGTGATCC AGCTTTCGCT GGTGGCTGGC
TTTTTTCATC AAACCTTAAG TGAAACCTTA CAAGATCAGA TCAGCACCAA AGCGCTAATC
CAAGCGCGCG AAATTGCGAC CGATCCCAAT CTCATTGTGC TGATCCAACA AAATCGGCTT
GCTGAAGTGC AGGCCAAAAT CGATCGTTTA CAACGCATCT CGGATGCCAA TTTTATTGTG
ATTGGTGATG CCAATGGCAT TCGCATCGCG CATCCAGATG AGCAAAAAAT CGGTTTACCG
ATGCAAGGCG GTGACAGCCG TCGTGCATTA AAAGAGGGCG AATATTACAC CTCAACCCAA
AAAGGCAGCC TAGGCTGGGC CATTCGTGGC AAAGCCGCGA TTGTCGCCCC TTCGGGAGAG
ATCCTCGGCG TGGTTTCTGT TGGCTACCTG CTCGATAACA TCAGCAGTTG GCTGCGGGTT
TACTCCTACC CAGTGATTTT CACTGTGCTG CTTTTAATGC TGCTTTCTGC GCTCGGCGCG
TGGATCTTTA CCCGCCATAT CAAACAGCAG ATGTTCAATA TGGAGCCGGA AGAGATCGCC
ATGAACCTCA ACCTACAGCA GTCGATTTTA CAAAGTGTGT ATGAAGGTAT CGTCGCGATC
AGCTTGAAAG GGGAAATCCT GTCCGTCAAT GCTAAGGCAC TGAATATTTT GGGTATTGCC
CATCAGCCGA CCCATTTGAT TGGGCGTAAT GTTCAAGAGT TCATCACTCC AACCTGCTTT
TTTATGGGCG CAAGCCCGTT TGGCAAGTTG GCGCAGCAAA ACCGTGTCAG CCAGCAAGAT
GAACTGATCA GCTGTAATGG TGAAACCTTG GTCGCGAATC GGGTACCGAT CAATTCTGGC
CAGCAGCAAA TCGGCTGGGT GGTCAGCTTT CGTCGCCGCA ATGATTTCAA CACACTCACC
TCGCAGCTCA CCCAGATCCG TCAACATAAC GATAATCTGC ACGTGATGAG TCACGAGTTT
GCCAACCGCC TCTCGACCAT CGGCGGCTTA ATTCAAATCG GTGCGTACGA CGAAGCAGTG
AAAACCATTC GCCGCGAAAC GGCAGAGCAG CAACAGCTGA TCGATTTCAT CGCCCAAACT
TTTCACCCGA AAGTGATCGC GGGGTTACTG CTGGGAAAAT ACAGCCGCGC CAAAGAGTTA
GGACTGTGTT TAGAGTTCGA TCCGCTATCG CATCTGCACC AAGAGCCGCA GTGCATGACT
TCAGATGAAC TGGCGGCGGT ACTTGGCAAT CTGCTGGATA ACGCGTTTGA AGCCACGCTA
AAAAATCCAC ACAGCAATAA AACCATTTCT CTGCTGCTGA CCGATAACGG TGCGGAGTTG
GTGATTGAAG TGGCGGACAA CGGCATCGGG ATCTCGGCCG ACATCGCCCA AACTTTGTTT
CTCAAGGGAG TGAGTAGCAA AAACCAAGAA GGACACGGTA TCGGACTTTA CCTTGTCCAT
CAATTTGTCA CTCAGGCTCA TGGATCGATT CTTATCGACA GTGCGGAGCC GCAAGGGACT
ATTTTTTCTA TTTTTATTCC CAATAGACCC AAAACGCTTG CGGCGGAAAA CCTTCCAGCG
CTTGCCGAAC GGGCATAA
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| Protein sequence | MNISLTQFLH TKVCQTLSFQ QRVGALLVAM VVIQLSLVAG FFHQTLSETL QDQISTKALI
QAREIATDPN LIVLIQQNRL AEVQAKIDRL QRISDANFIV IGDANGIRIA HPDEQKIGLP
MQGGDSRRAL KEGEYYTSTQ KGSLGWAIRG KAAIVAPSGE ILGVVSVGYL LDNISSWLRV
YSYPVIFTVL LLMLLSALGA WIFTRHIKQQ MFNMEPEEIA MNLNLQQSIL QSVYEGIVAI
SLKGEILSVN AKALNILGIA HQPTHLIGRN VQEFITPTCF FMGASPFGKL AQQNRVSQQD
ELISCNGETL VANRVPINSG QQQIGWVVSF RRRNDFNTLT SQLTQIRQHN DNLHVMSHEF
ANRLSTIGGL IQIGAYDEAV KTIRRETAEQ QQLIDFIAQT FHPKVIAGLL LGKYSRAKEL
GLCLEFDPLS HLHQEPQCMT SDELAAVLGN LLDNAFEATL KNPHSNKTIS LLLTDNGAEL
VIEVADNGIG ISADIAQTLF LKGVSSKNQE GHGIGLYLVH QFVTQAHGSI LIDSAEPQGT
IFSIFIPNRP KTLAAENLPA LAERA
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