Gene VC0395_A0311 details

Gene Information

• Locus tag: VC0395_A0311
• ID: 5137332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 329090
• End bp: 331072
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640531769
• Product: hypothetical protein
• Protein accession: YP_001216267
• Protein GI: 147673392
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2015] Alkyl sulfatase and related hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 55
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAG TCTTTAAACC CACTTTGTTG GCGGTATTAG TGGCCGCCTC TGCGCCCGTA 
TTAGCTCATT CATTGATTGC GGATACCAAA GCCCCGAGCC CTACCACAAA AGCGTTTGCG 
GCTGAGCAAC GCAATACGCT GCCGTTTGCG GATCAGGAAG ATTTCAAATT GGTCGAGAAA 
GGTCTGATCG CGCAGCAAAA AGATCTCGAA ATCAAAGATG CGAATGGCAA GGTGGTTTGG 
GAATTGGGTA ATTACCGCTT TTTATTGGAT GGACTCGACT ATGACAGCAT CCATCCTAGT 
TTACAGCGTC AAGCGCAACT GAATATGCAT CACGGCCTGT ATAAAGTGAC GGATCGCATT 
TATCAGGTAC GTGGCTACGA TCTGGCCAAC ATCACCTTTG TAAAGGGCGA TACGGGATGG 
ATTGTGTTTG ATCCATTGAC CGTTCCTGCT ACGGCTAAAG CGGCGCTGGA TTTTGTTAAC 
CAAGAGCTAG GTGAGCGTCC CGTTAAAGCT GTGGTGTACA GTCATGCGCA TGCTGACCAT 
TTTGGTGGTG TCAAAGGCAT TGTGAGCCAA GAGCAGGTCG ACCGAGGTGA AGTGCCGATC 
ATCGCACCGA AAGGCTTTTT AAATCACGCG GTGGCTGAGA ATGTTTTGGC AGGAAATGCC 
ATGTCGCGTC GTACGACTTA TCAATATGGC AACGTTTTAC CGAAAGGGGC GACCGGGCAG 
GTGGATGCCG CGATTGGTAA GAATGTCGCG CAAGGTGAAG TGAGCTTGAT TGCGCCAACC 
AAAGTCATTT CTGAGCAAAC GGAAACTGTG GTGATCGATG GCGTAACCAT GGAGTTCCAG 
AATACACCGG GAACCGAATC TCCAGCGGAA ATGAACACCT ACTTCCCACA GTTTAAAGCC 
TTGTGGATGG CAGAAAACAC CGTTGGTGGT TTGCACAACG TCTACACCTT ACGTGGTGCA 
GAAGTGCGAG ATGCCAAGGC GTGGAGCAAA TACATCAATG AGTCGATTCA TATGTACGCG 
AAAGAGGCGG ATGTGATGTT TGCTTCACAC ACATGGCCGC GTTGGGGGAA CGACAATATC 
AACCATTTCC TGCGTAAACA GCGTGATATG TACGGCTACA TTCATGATCA GGCTTTACGT 
TTGGCCAACC ACGGTGTCAC CATCAATGAA ATTCAAGACG AATTCCATGT ACCGGATGTG 
TTAGCACACG AGTGGTACAA CCGAGGTTAT CACGGTAGTT ACCACCGCAA TGCTAAAGCG 
GTGATCAACA AATATCTGGG GTATTTTGAT ATGAATCCCG CCACGTTACG CCCATTGGCT 
CCAACCGATG CGGCTCCTAA ATATGTCGCG GCGATGGGCG GCATGGATAA CGTGATTAAG 
CTTGGGAAAG AAGCGTTTGA TAAAGGCGAG TTTCGTTGGT GTGCAGAGAT TGTCGATAAA 
GCCGTGTTTG CAGAGCCGAG CAATAAACAA GCTCGTTACT TACAGGCGGA TTGCTTGGAG 
CAACTGGGCT ACCAGAGTGA ATCGGCAGGG GAGCGTAACA CTTATTTGAT GGGCGCGTAT 
GAGTTGCGTA ATGGGGTACC GAAAGTGTCA GCAACCAAAA CGGCGGGTGC TGATACGGTT 
GTGGCGATGG ATACTGAGCT GTTCCTCGAC TATTTGGGCG TTCGCCTCAA TGGCGACAAA 
GCCGCTGGTA TTGATTACAC CATTAATTTC GTCTTGCCAG ATGTGAATGA GAAATTCTTG 
GTTGAACTGG AAAATGCCCA CTTGAATAAC TTAAAAGGCA TTCAATCGGA GAATCCGGAT 
ATGACGCTGA CTCTCAATCG TGCTCAGCTC AATCAAGTAT TGATGGGTAA AACCACCATT 
CAACAGTTGG CCAAAGAAGG CAAAGCGAAG ATTGAAGGCA ACGCGCAAGC GCTGACCGAT 
ATCGCAGGTA TGCTGGATAA CTTCGAATTC TGGTTCAATA TTATCGAACC GAAAACGAAG 
TAA 

 

Protein sequence

MKTVFKPTLL AVLVAASAPV LAHSLIADTK APSPTTKAFA AEQRNTLPFA DQEDFKLVEK 
GLIAQQKDLE IKDANGKVVW ELGNYRFLLD GLDYDSIHPS LQRQAQLNMH HGLYKVTDRI 
YQVRGYDLAN ITFVKGDTGW IVFDPLTVPA TAKAALDFVN QELGERPVKA VVYSHAHADH 
FGGVKGIVSQ EQVDRGEVPI IAPKGFLNHA VAENVLAGNA MSRRTTYQYG NVLPKGATGQ 
VDAAIGKNVA QGEVSLIAPT KVISEQTETV VIDGVTMEFQ NTPGTESPAE MNTYFPQFKA 
LWMAENTVGG LHNVYTLRGA EVRDAKAWSK YINESIHMYA KEADVMFASH TWPRWGNDNI 
NHFLRKQRDM YGYIHDQALR LANHGVTINE IQDEFHVPDV LAHEWYNRGY HGSYHRNAKA 
VINKYLGYFD MNPATLRPLA PTDAAPKYVA AMGGMDNVIK LGKEAFDKGE FRWCAEIVDK 
AVFAEPSNKQ ARYLQADCLE QLGYQSESAG ERNTYLMGAY ELRNGVPKVS ATKTAGADTV 
VAMDTELFLD YLGVRLNGDK AAGIDYTINF VLPDVNEKFL VELENAHLNN LKGIQSENPD 
MTLTLNRAQL NQVLMGKTTI QQLAKEGKAK IEGNAQALTD IAGMLDNFEF WFNIIEPKTK