Gene VC0395_A0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0279 
Symbol 
ID5136404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp293608 
End bp293931 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID640531737 
ProductHesB/YadR/YfhF family protein 
Protein accessionYP_001216235 
Protein GI147674050 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00587382 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCA CTCTTAGCGA AACCGCAGCA AGCCGAGTAA AAACTTTTCT GGATAATCGT 
GGAAAAGGCA TCGGTTTACG TCTTGGTGTC AAGACAACTG GGTGTTCGGG AATGGCGTAT
GTGCTCGAGT TTGTTGATGA TCTCAACGAA GAAGACCACG TATTTGAAAG CCATGGTGTG
AAGGTGATCA TTGACACCAA AAGCATGGTC TATTTAGATG GCACTCAACT CGATTACAAA
AAAGAAGGGT TAAACGAAGG CTTTGAATTC AACAACCCAA ATGTCAAAAG CGAATGTGGT
TGTGGTGAAA GCTTCAACGT TTAA
 
Protein sequence
MAVTLSETAA SRVKTFLDNR GKGIGLRLGV KTTGCSGMAY VLEFVDDLNE EDHVFESHGV 
KVIIDTKSMV YLDGTQLDYK KEGLNEGFEF NNPNVKSECG CGESFNV