| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0251 |
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| Symbol | |
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| ID | 5136233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 260275 |
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| End bp | 261675 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531709 |
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| Product | putative protease |
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| Protein accession | YP_001216207 |
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| Protein GI | 147674148 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGC CAAAAACCTT TGTTCCAGAA CTCCTTTCAC CTGCGGGTAG CCTGAAGAAT
ATGCGCTACG CTTTTGCCTA CGGGGCAGAT GCGGTATATG CCGGCCAACC TCGTTACAGC
CTGCGCGTAC GTAACAATGA GTTCAACCAC GAAAACCTAC AAATCGGCAT TAATGAAGCC
CACGCACTGG GTAAAAAATT CTATGTGGTG TGTAACATTC AGCCGCACAA CTCTAAGCTG
AAAACCTTCA TCCGTGACCT TAAGCCGGTG ATTGATATGG GGCCGGATGC GCTCATCATG
TCTGACCCTG GCCTTATCAT GATGGTTCGT GAAGAATTCC CGCACATGCC GATCCACCTG
TCGGTACAAG CGAATGCGGT GAACTGGGCA ACCGTGAAAT TCTGGGCTTC ACAAGGCGTT
GAGCGTGTGA TTGTTTCTCG TGAGCTCTCT TTAGAAGAAA TCGAAGAGAT CCGCGAAAAA
TGCCCGAATA CCGAAATTGA AGTGTTCGTG CATGGCGCTC TATGTATGGC TTATTCCGGT
CGTTGCTTGC TGTCTGGTTA CATCAACAAG CGCGATCCAA ACCAAGGTAC TTGCACTAAC
GCATGCCGTT GGGAATACAA AGTTGAAGCA GCAAAAGAAG ATGAAGCAGG TCAGATCGTT
GAACAGTTTG ACCCTAATGC AGCACAAGCC ATCGAAGTTC AAAATGAACG TCCAGACACC
ACCATCGGGG CCGGCAAACC GATTGATGAT GTCGTACTGC TTTCTGAGAG CCATCGTCCT
GATGAGAAAA TGGCCGCCTT TGAAGATGAG CACGGCACCT ACATCATGAA CTCCAAAGAT
CTGCGTGCAG TACAGCATGT TGAGCGCCTA ACTCAAATGG GTGTGCACTC ACTGAAAATC
GAAGGCCGTA CCAAATCTTT CTACTACTGC GCACGTACCG CGCAAGTGTA CCGTAAAGCG
ATTGATGATG CGGTAGCGGG CAAGCCATTC GATGATAGCC TGATGACTAC CCTAGAAAGC
TTGGCGCACC GTGGCTATAC CGAAGGTTTC TTACGTCGCC ATACGCACGA TGCTTACCAA
AACTACGACT ACGGCTACTC GGTTTCCGAC ACTCAACAGT TTGTCGGTGA ATTTACCGGT
AAACGCCGCG GCGCAATGGC CGAAGTGGAA GTAAAGAACA AATTTGTGCT CGGCGATAGC
CTTGAGCTGA TGACGCCAAA AGGCAATGTC ATCTTCACTT TAGAAGCGAT GGAAAACCGC
AAAGGTGAAG CAACAGATGA TGCCAAAGGC AACGGTCACT TTGTTTACAT TCCAGTTCCG
GAAGAGTTGG ATCTCAGCTA CGCACTGCTG ATGCGTAACC TAGTGCAAGG GCAGGATACC
CGTAACCCAA CAGGCAAGTA A
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| Protein sequence | MTTPKTFVPE LLSPAGSLKN MRYAFAYGAD AVYAGQPRYS LRVRNNEFNH ENLQIGINEA
HALGKKFYVV CNIQPHNSKL KTFIRDLKPV IDMGPDALIM SDPGLIMMVR EEFPHMPIHL
SVQANAVNWA TVKFWASQGV ERVIVSRELS LEEIEEIREK CPNTEIEVFV HGALCMAYSG
RCLLSGYINK RDPNQGTCTN ACRWEYKVEA AKEDEAGQIV EQFDPNAAQA IEVQNERPDT
TIGAGKPIDD VVLLSESHRP DEKMAAFEDE HGTYIMNSKD LRAVQHVERL TQMGVHSLKI
EGRTKSFYYC ARTAQVYRKA IDDAVAGKPF DDSLMTTLES LAHRGYTEGF LRRHTHDAYQ
NYDYGYSVSD TQQFVGEFTG KRRGAMAEVE VKNKFVLGDS LELMTPKGNV IFTLEAMENR
KGEATDDAKG NGHFVYIPVP EELDLSYALL MRNLVQGQDT RNPTGK
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