Gene VC0395_A0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0165 
SymbolrrmJ 
ID5136133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp168161 
End bp168790 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640531625 
Product23S rRNA methyltransferase J 
Protein accessionYP_001216130 
Protein GI147673945 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000113387 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC AGAAACACTC GGCCAGCTCA ACTCGCTGGT TAAAAGAGCA TTTTGACGAC 
AAATATGTTA ACGAAGCAAA GAAGAAAGGC TATCGTTCAC GTGCTATCTT CAAAATAGAA
GAGATCCAAA ACAAAGATAA ACTACTAAAA GCTGGTATGA CAGTTGTCGA TCTTGGCGCT
GCACCTGGTG GATGGTCGCA ATTTGCGGCC AAAGTAGTTG GCGAAGGTGG GCGTGTTATT
GCATGTGACC TTTTACCTAT GGAGTCGATT GCGGGGGTGT CTTTCTTGCA AGGTGATTTC
CGTGAGGAAG CGGTGCTCAA TGCATTGCTC GATCGAATCC AGCCAGATAT GGTTGATGTA
GTGATGTCTG ATATGGCACC TAATATGGCG GGTAACTTGT CCGTCGATCA GCCTCGCGCC
ATGTATCTTG TCGAATTGGC ACTGGATATG TGTCGACAAG TTCTGGCTCC CAATGGTAGT
TTTGTGGTGA AAGTGTTTCA AGGAGAAGGC TTTGATGATT ATGTCAAAGC AGTAAGAGAC
CTGTTTAAAG TGGTTAAAAT CCGTAAACCG GACTCCTCTC GATCACGTTC ACGAGAAGTT
TTTATCGTAG CGACTGGTTA CAAAGGTTAA
 
Protein sequence
MSKQKHSASS TRWLKEHFDD KYVNEAKKKG YRSRAIFKIE EIQNKDKLLK AGMTVVDLGA 
APGGWSQFAA KVVGEGGRVI ACDLLPMESI AGVSFLQGDF REEAVLNALL DRIQPDMVDV
VMSDMAPNMA GNLSVDQPRA MYLVELALDM CRQVLAPNGS FVVKVFQGEG FDDYVKAVRD
LFKVVKIRKP DSSRSRSREV FIVATGYKG