Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0163 |
Symbol | greA |
ID | 5137237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 167192 |
End bp | 167668 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531623 |
Product | transcription elongation factor GreA |
Protein accession | YP_001216128 |
Protein GI | 147675665 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000328888 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAA AAGTTCCAAT GACAGCGCGT GGTGAAAAGC TACTGCGTGA AGAACTCGAT AGACTATTAA AGCTCAGACC TAAAATTACA GAAGCGATTG CCGAAGCTCG TGAGCTTGGC GATTTGAAAG AGAATGCGGA ATACCATGCT GCACGTGAAG AGCAGGGGAT CTGTGAAGCG CAAATTCGTG ATATCGAATA CAAGCTATCA GTGGCGCAGG TTATTGATGT CACTAAGATG GAAAACAGTG GCAAAGTCAT TTTTGGTGCC ACGGTGACGG TGATTGATGT CAACAGCGAC GAAGAGAAGA CTTACCAAAT CGTTGGTGAT GATGAAGCGG ATATCAAATC AGGTCGTATT TCAGTCAATT CGCCGATTGC TCGTGGTTTG ATTGGTAAAT TTGAAGGCGA TGAAGTCTCG ATTGCGACTC CAGGGGGCAA TAAGGTCTTT GAAATTGATC GCGTGGAATA TCTATAG
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Protein sequence | MMEKVPMTAR GEKLLREELD RLLKLRPKIT EAIAEARELG DLKENAEYHA AREEQGICEA QIRDIEYKLS VAQVIDVTKM ENSGKVIFGA TVTVIDVNSD EEKTYQIVGD DEADIKSGRI SVNSPIARGL IGKFEGDEVS IATPGGNKVF EIDRVEYL
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