| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0161 |
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| Symbol | dacB |
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| ID | 5136152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 164071 |
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| End bp | 165534 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531621 |
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| Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
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| Protein accession | YP_001216126 |
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| Protein GI | 147673807 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000235631 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTGGATG TTATTGCTAT GCTTTTTCGC TTCATACCTG TTTGGTTACT CTCTATTAGC
GGTTTTCTAA TAGCCTCTCC GATTTACGCA CAAACACCAT TGACTGCCGC AACGACTAAA
CTTCCTCAAG GGGCACGTTA TAGCCTATTG ATTGAAGATG TCGCATTACA GCAGAACACT
CTCGAACTCA ATACTCATCT GTACTATCCC CCCGCTAGCA CCCAGAAGAT TTTGACGGCA
CTCGCCGCAA AATTAGAACT GGGTGATAAG TTTCGCTTTC ACACTGATTT AATGCGTTCA
GGGCAAGATT GGATCATTCG CTTTTCAGGC GACCCCACCC TGACCACCGC AGATTTAACG
ACATTGCTCA AAGCGATGAA AGCGCAAAGT GGCGGTAGGA TTGAGGGCGA TTTGTGGCTG
GATAATAGTG TATTTAGTGG ATATGAGCGT GCGGTAGGCT GGCCATGGGA TATTTTAGGC
GTCTGCTATA GCGCCCCAGC CAGTGCCATC AACCTCGATG CTAACTGTAT CCAGGCGTCT
ATTTATACCG AACCACAAGG TAAAACGCGC GTTTATGTAC CAGAGCACTA CCCTGTGCAT
GTTCAGTCGC AAGCCATCAG CGTGACACAG AGCGAACAAG AGAGTTTACT GTGTGACTTA
GAACTGACGG CAACGCCTGA GAATCACTAT ACGCTGGATG GCTGTTTAGC CCTACGAGAC
AAACCCTTAC CACTAAAATT TGCGGTGCAA GATACTGGGA TCTACACCCA GCGAGTGGTC
TATCGTCTCC TCAGCCAGCT AAACATCGAG CTCAAAGGGA AGATAAAAGT CGGTAAAGCA
AATACCAAAC AAGCGCAGAA AATCGCTTCT CATCACTCCC AGCCGCTGCC TGTGTTACTG
AAAACCATGT TGCAAGAGTC CGACAACCTG ATCGCCGATA CCTTGACCAA AGCCTTGGGA
CACCGTTTTT ACTCTCAACC CGGTAGCTTT ACCAACGGAA CACAAGCCAT TAAACAGATT
TTTTACTCGC GCACGGGCAT TTCATTAGAA GATACTCAGC TCGCCGATGG CTCTGGCCTT
TCACGTAATA ACCGGATGCG TCCACAAGTG ATGCTGGAAA CTCTTCGCTA CCTTTATCAG
CACGAAGCTG AGCTTGGTTT AATTGCTATG CTGCCTTCAG CGGGAGAATC GGGCACTTTG
CAATATCGAC GCAGTATGCG TGCGCCGCAA ATCAGTGGCC AAATTAAAGC GAAAAGTGGT
TCACTTTATG GCACTTACAA TATGGCGGGC TTTGTGATGG ACGAAAATCA GCGCCCTAAG
ACTCTGTTTG TTCAATTCGT CACCGACTAT TTCCCTCCGA GATCCAATCC TGAGGTAGCG
GTTGAGCCGC CGATTATCCA GTTTGAAACT CAGCTCTATC AAGAGCTTAT TCAGTTTAAT
CGTTTGGCAT CTAAGCCAAA CTAG
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| Protein sequence | MVDVIAMLFR FIPVWLLSIS GFLIASPIYA QTPLTAATTK LPQGARYSLL IEDVALQQNT
LELNTHLYYP PASTQKILTA LAAKLELGDK FRFHTDLMRS GQDWIIRFSG DPTLTTADLT
TLLKAMKAQS GGRIEGDLWL DNSVFSGYER AVGWPWDILG VCYSAPASAI NLDANCIQAS
IYTEPQGKTR VYVPEHYPVH VQSQAISVTQ SEQESLLCDL ELTATPENHY TLDGCLALRD
KPLPLKFAVQ DTGIYTQRVV YRLLSQLNIE LKGKIKVGKA NTKQAQKIAS HHSQPLPVLL
KTMLQESDNL IADTLTKALG HRFYSQPGSF TNGTQAIKQI FYSRTGISLE DTQLADGSGL
SRNNRMRPQV MLETLRYLYQ HEAELGLIAM LPSAGESGTL QYRRSMRAPQ ISGQIKAKSG
SLYGTYNMAG FVMDENQRPK TLFVQFVTDY FPPRSNPEVA VEPPIIQFET QLYQELIQFN
RLASKPN
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