| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0148 |
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| Symbol | |
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| ID | 5136790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 145283 |
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| End bp | 146269 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531608 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_001216113 |
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| Protein GI | 147674805 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTACT TTTTAAGACG ATTGTCGTTC TATTTTGCCG CGTTGCTGGT CGCAGCAACA
TTAAACTTTA TTATTCCGCG TGCCATGCCT GGTGATCCGG TCACCATGAT GTTTGCTCAC
GCAACCGCAC AAGTTACTCC AGAACGTATC GAAGCCATGA AACAGTTACT TGGCTTTGTT
GAAGGTCCTT GGTATGTGCA GTATCTGACG TACATCAAAA GCATCCTGAC TTGGGAGCTG
GGCACTTCAA TCAAATTCTA CCCTTTAAGT GTGAATGAGC TGCTTGGTGG TGCATTTGGT
TGGTCACTGT TCCTTGCGGG AACGGCGGTT ATCATCTCTT TCTCAATCGG CTCTGTGCTG
GGGATTTTTG CCGCATGGAA ACGGGGCAGC CGTTACGACA CTTTTATTAC TCCGGGAATG
CTGGTGATTC AGGCTGTACC ACAAGTGGTT ATTGCCATGC TCGCCATGTT CACTTTCGCT
ATCGGTTTAA GTTGGTTCCC AACTGGCTAC GCATACACAG CAGGTACCAC TCCAGATTGG
ACGAGTTGGG CATTCATCAA AGACGTCGGT TATCACGCCG TTCTTCCTCT GTTCTGTGCT
TCGATCGTGC AGATCGGTGG CTTCTTGGTC AACATGCGTA ACAACATGAT TAACCTGCTC
GCTGAAGATT ACATCACCAT GGCAAAAGGC AAAGGCCTGA GCGAAAACCG CGTGGTATTT
AACTACGCAG CACGTAACGC TCTACTGCCA AGTGTGACCG CTCTTTCTAT GTCGCTCGGT
ATGGCGATTG GTGGTCAGTT GATTATCGAA ATCATCTTCA ACTACCCAGG TTTAGGCACT
GTACTGTTCA ACGCGATTAC CGCACGTGAC TACCAAGTTC TGCAAGGTCA GCTGCTGATC
ATGACGCTGT TCATGCTGTT CTTTAACCTG CTGGCGGACA TGTTATACGT TGTTCTTGAC
CCTCGCTTAC GCAAGGGAGG TAAATAA
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| Protein sequence | MGYFLRRLSF YFAALLVAAT LNFIIPRAMP GDPVTMMFAH ATAQVTPERI EAMKQLLGFV
EGPWYVQYLT YIKSILTWEL GTSIKFYPLS VNELLGGAFG WSLFLAGTAV IISFSIGSVL
GIFAAWKRGS RYDTFITPGM LVIQAVPQVV IAMLAMFTFA IGLSWFPTGY AYTAGTTPDW
TSWAFIKDVG YHAVLPLFCA SIVQIGGFLV NMRNNMINLL AEDYITMAKG KGLSENRVVF
NYAARNALLP SVTALSMSLG MAIGGQLIIE IIFNYPGLGT VLFNAITARD YQVLQGQLLI
MTLFMLFFNL LADMLYVVLD PRLRKGGK
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