Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0133 |
Symbol | acnB |
ID | 5136031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 124676 |
End bp | 127273 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640531593 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_001216098 |
Protein GI | 147673282 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000234886 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTGAAG CCTACCGTAA ACACGTCGCA GAGCGTGCCG CTGAAGGAGT TGTACCTAAA CCCCTAGACG CAGAGCAAGT CGCAGGACTT GTCGAACTTC TGAAAAATCC CCCACAAGGT GAAGAAGCTT TCATTCTTGA CCTACTTGAA AATCGCATTC CTCCGGGTGT CGATGAAGCG GCTTACGTGA AAGCAGGTTT CTTGACGGCC GTTGCGAGAG GCGAGGTCGC ATCTCCGTTG GTGAGTCGTG AAAAAGCGGC TGAGCTACTC GGTACCATGC AAGGCGGCTA CAACATCGAA CCGCTGATTG AATTACTGGA CGATAGCGCG CTGGCTCCGA TTGCCGCGAA AGCGCTGTCT CATACCCTCT TGATGTTTGA TAACTTCTAC GATGTGGAAG AAAAAGCCAA AGCGGGCAAC CCATTTGCGA AACAAGTGCT GCAATCTTGG GCTGATGCAG AGTGGTTCCT ATCTAAGCCG GCACTGCCTG AAAAAGTGAC CTTAACCGTA TTTAAAGTGA CGGGGGAGAC CAACACGGAC GATCTCTCTC CAGCGCCTGA TGCATGGTCA CGTCCTGATA TTCCTGTACA CGCATTAGCC ATGCTGAAAA ACGCGCGCGA TGGCATTGAG CCGGATGTAC CGGGTAAAGT TGGCCCGATC AAACAGATCG AAGCACTTAA AGCCAAAGGT CACCAACTGG TTTACGTGGG GGATGTGGTC GGTACCGGTT CATCACGTAA ATCGGCAACC AACTCAGTGT TGTGGTTTAT GGGAGACGAT ATTCCTAATG TGCCTAATAA GCGCACGGGC GGATATGTGC TTGGCGGTAA AATCGCTCCA ATCTTCTTTA ACACCATGGA AGATGCTGGC GCGCTGCCGA TCGAAGTGGA TGTCTCTAAG CTCAATATGG GCGATGTGAT CGACGTTTAC CCATTTGAAG GCAAAGTGTG TAATCACGCG ACGGGCGAAG TGCTTGCGAC TTTCAAACTG AAAACCGATG TCCTGTACGA TGAAGTGCGT GCGGGTGGTC GTATTCCGCT GATCGTTGGA CGTGGCCTGA CGGATAAAGC GCGTCACGCA TTAGGTCTGG AAGCGTCAAA AGAGTTTCGT CGCCCTGTGG CGGTTGCAGA TAGCGGTAAA GGTTATACGC TGGCTCAGAA AATGGTGGGT AAAGCGTGTG GTGTACAAGG CATTCGCCCA GGCACTTACT GTGAACCTAA GATGACGACT GTCGGTTCGC AAGATACCAC TGGCCCAATG ACGCGTGATG AATTGAAAGA TTTGGCCTGT CTTGGTTTCT CTGCCGATTT AGTGATGCAG TCTTTCTGTC ATACCTCGGC TTATCCAAAG CCTGTCGATG TGCAGACTCA CCACACATTA CCTGATTTCA TCATGAACCG TGGCGGTGTT TCACTGCGTC CGGGCGATGG TGTTATCCAC TCATGGTTAA ACCGCATGCT ACTGCCAGAT ACAGTCGGTA CTGGTGGTGA CTCGCATACT CGTTTCCCAT TGGGTATTTC TTTCCCAGCA GGTTCTGGTC TGGTGGCGTT TGCTGCCGCG ACTGGGGTAA TGCCACTGGA TATGCCTGAA TCGGTTCTGG TGCGCTTTAA GGGTAAGATG CAACCGGGGA TCACGTTGCG TGATCTGGTG CATGCCATCC CTTATTACGG CATCAAGCAA GGTCTGCTCA CAGTAGAAAA AGCAGGTAAG ATCAACGAAT TCTCCGGTCG TATCCTAGAG ATCGAAGGGG TTGAACACCT GACGGTTGAG CAGGCGTTTG AGCTTTCTGA TGCATCCGCA GAACGTTCTG CGGCGGGTTG TACGGTGAAA CTGTCACAAG CATCGATTGA AGAGTACCTC AACTCGAATA TCGTGATGTT GAAGTGGATG ATTGCTGAAG GTTATGGCGA TCGCCGTACT ATTGAGCGCC GTATTCAAGC GATGGAAGCT TGGTTAGCTA ACCCAACACT GATGGAAGCG GACAAAGATG CCCAGTACGC GCATGTGATT GAGATTGATC TTGCTGAGAT CAAAGAGCCA ATCCTATGTG CGCCAAACGA TCCAGACGAT GCTCGTCTGC TTTCTGAGTG TGCGGGTGAA ACCATCAATG AAGTGTTCAT CGGCTCTTGT ATGACCAACA TCGGGCACTT CCGCGCGGCG GGTAAATTGC TTGAAAAATT CAATGGCCAA TTGAATACCC GTTTGTGGGT CGCACCGCCA ACCAAGATGG ATCGTGACCA GCTGATTGAA GAGGGTTACT ACGGTATTTT CGGTCGTGCT GGCGTGCGTA TCGAAACGCC GGGATGTTCG TTGTGTATGG GTAACCAAGC ACGCGTAGCG GACAAAGCAA CCGTGATGTC GACTTCAACG CGTAACTTCC CGAACCGTTT GGGCACAGGG GCTAACGTTT ACCTCTCTTC TGCTGAATTA GCGGCAGTGG GAGCGATTTT GGGTCGAATC CCAAGCGTAG CGGAGTACAT GGATTACGCG AAGCAGATTG ATGCGGCGGC CGCGGATACC TACCGTTACC TCAACTTCCA CCGTATGGGT CAGTACACCA GTAAAGCAGA TTCGGTCATT TTCCAAGAAC CTGCATAA
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Protein sequence | MLEAYRKHVA ERAAEGVVPK PLDAEQVAGL VELLKNPPQG EEAFILDLLE NRIPPGVDEA AYVKAGFLTA VARGEVASPL VSREKAAELL GTMQGGYNIE PLIELLDDSA LAPIAAKALS HTLLMFDNFY DVEEKAKAGN PFAKQVLQSW ADAEWFLSKP ALPEKVTLTV FKVTGETNTD DLSPAPDAWS RPDIPVHALA MLKNARDGIE PDVPGKVGPI KQIEALKAKG HQLVYVGDVV GTGSSRKSAT NSVLWFMGDD IPNVPNKRTG GYVLGGKIAP IFFNTMEDAG ALPIEVDVSK LNMGDVIDVY PFEGKVCNHA TGEVLATFKL KTDVLYDEVR AGGRIPLIVG RGLTDKARHA LGLEASKEFR RPVAVADSGK GYTLAQKMVG KACGVQGIRP GTYCEPKMTT VGSQDTTGPM TRDELKDLAC LGFSADLVMQ SFCHTSAYPK PVDVQTHHTL PDFIMNRGGV SLRPGDGVIH SWLNRMLLPD TVGTGGDSHT RFPLGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM QPGITLRDLV HAIPYYGIKQ GLLTVEKAGK INEFSGRILE IEGVEHLTVE QAFELSDASA ERSAAGCTVK LSQASIEEYL NSNIVMLKWM IAEGYGDRRT IERRIQAMEA WLANPTLMEA DKDAQYAHVI EIDLAEIKEP ILCAPNDPDD ARLLSECAGE TINEVFIGSC MTNIGHFRAA GKLLEKFNGQ LNTRLWVAPP TKMDRDQLIE EGYYGIFGRA GVRIETPGCS LCMGNQARVA DKATVMSTST RNFPNRLGTG ANVYLSSAEL AAVGAILGRI PSVAEYMDYA KQIDAAAADT YRYLNFHRMG QYTSKADSVI FQEPA
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