| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0123 |
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| Symbol | panB |
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| ID | 5135959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 110360 |
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| End bp | 111154 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531583 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001216088 |
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| Protein GI | 147673962 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00580604 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TTACCATAAA CGACCTGATG AAATGGAAGC AGGAAGGTCG CAAATTTGCT
ACATCAACCG CTTATGATGC GAGTTTTGCT CAGTTATTTG AGAGCCAAGA AATGCCCGTC
TTATTGGTCG GTGATTCACT TGGCATGGTG TTACAAGGAG AAACCGACAC CTTACCCGTG
ACGGTGGATG ACATTGCGTA TCACACCCGC TGTGTGCGTA AAGGCAGCCC CAATTGTCTG
CTGATGGCTG ACATGCCTTT CATGAGCTAC GCCACACCAG AACAAGCGTG TGAAAACGCG
GCCAAACTGG TTCGCGCCGG TGCAAACATG GTGAAAATTG AAGGTGGCGA TTGGTTAGTC
GACACCGTAA AAATGTTGAC TGAACGTGCA GTGCCTGTGT GTGCTCACCT CGGTTTAACG
CCGCAGTCGG TCAATATTTT TGGTGGCTAC AAAGTACAAG GCCGCGAGCA AGATAAAGCG
GATCGCATGG TACGTGATGC GTTGGCTCTG CAAGAAGCGG GCGCACAAAT TGTCCTGCTA
GAGTGCGTTC CAGCCGAACT CGCCAACCGA ATTACTCAAA TTTTGGATGT TCCCGTAATA
GGTATTGGCG CGGGTAATGG TACTGACGGC CAAATTTTGG TGATGCACGA TATGTTTGGA
ATTTCGGCGA ACTACATGCC AAAATTCTCG AAAAATTTCT TGGCTGAGAC TGGCGATATT
CGCCAAGCCG TTGCCAAATA TATCGAAGAT GTTGCCAGTG GCGCGTTTCC CGATCTCGCC
CACACCATTG CCTAA
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| Protein sequence | MKKITINDLM KWKQEGRKFA TSTAYDASFA QLFESQEMPV LLVGDSLGMV LQGETDTLPV
TVDDIAYHTR CVRKGSPNCL LMADMPFMSY ATPEQACENA AKLVRAGANM VKIEGGDWLV
DTVKMLTERA VPVCAHLGLT PQSVNIFGGY KVQGREQDKA DRMVRDALAL QEAGAQIVLL
ECVPAELANR ITQILDVPVI GIGAGNGTDG QILVMHDMFG ISANYMPKFS KNFLAETGDI
RQAVAKYIED VASGAFPDLA HTIA
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