Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0122 |
Symbol | panC |
ID | 5137765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 109468 |
End bp | 110349 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640531582 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_001216087 |
Protein GI | 147674534 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0223415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTT TTGCTGACAT CGCCGTTCTT CGCGAGCAGA TCAAACAGAT CAAGCGCGAA GGTCGCCGCG TCGCTTTTGT ACCGACCATG GGTAATTTAC ACGAAGGCCA TTTAACCCTG GTTCGTAAAG CTCGTGAGCT CGCTGACGTC GTCGTGGTGA GTATTTTCGT CAATCCGATG CAGTTTGATC GCGCAGAAGA TTTGAAAAAT TACCCACGTA CGCTTGAAGA AGACCTAAGC AAACTCAACG GCGAAGGGGT TGATCTGGTT TTAACGCCGA CACCCGAAAC CATGTACCCA CAAGGGTTGG ATAAGCAGAC CTTTGTTGAA GTGCCAGGGC TCTCTTACAT GCTCGAAGGC GCATCGCGTC CGGGACATTT CCGTGGCGTC GCGACCATTG TCACTAAACT GTTTAATATT GTGCAGCCAG ATGTCGCTTG CTTTGGCGAA AAAGATTTCC AGCAATTGGC GGTGATCCGT CAAATGGTAG AAGACTTGTG CATGGATATT GAGATTGTAG GCGTAGCGAC CGTACGTGAG TTAGATGGCC TTGCCATGAG TTCACGTAAT AATTTGCTGA CGCTGGATGA GCGCCAACGT GCGCCCGTTT TGGCGCGCAC TATGCGCTGG ATCAGTAGCG CCATTCGTGG TGGTCGCGAT GATTATCCAT CAATCATTGA AGATGCAGTG GATCAGTTGC GTGCGGCCGA TTTAGAGCCA GATGAAATCT TCATCCGTGA TGCACGCACT CTGCTACCTA TCAGCAGTGA GAGTAAGCAA GCCGTGATCC TGATGTCCGC TTTCCTCGGT AAAGTGCGTT TGATTGATAA CCAAGTTCTC GATCTGCAAA CCGACACCAA AGCCAGTAGC GAAGAAGAAT AA
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Protein sequence | MQVFADIAVL REQIKQIKRE GRRVAFVPTM GNLHEGHLTL VRKARELADV VVVSIFVNPM QFDRAEDLKN YPRTLEEDLS KLNGEGVDLV LTPTPETMYP QGLDKQTFVE VPGLSYMLEG ASRPGHFRGV ATIVTKLFNI VQPDVACFGE KDFQQLAVIR QMVEDLCMDI EIVGVATVRE LDGLAMSSRN NLLTLDERQR APVLARTMRW ISSAIRGGRD DYPSIIEDAV DQLRAADLEP DEIFIRDART LLPISSESKQ AVILMSAFLG KVRLIDNQVL DLQTDTKASS EEE
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