Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0120 |
Symbol | |
ID | 5135735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 107711 |
End bp | 108628 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531580 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_001216085 |
Protein GI | 147675033 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.695477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGCAC TGGAAATAGA ACAACTTAGA AAAACCTATG CCGGTGGCTT TGAAGCCCTC AAAGGCATTA GTCTACAAGT CAAAAAAGGC GATTTTTACG CTCTGCTGGG ACCCAATGGT GCGGGGAAGT CGACCACCAT TGGCATCATC TCATCGCTGG TCAATAAAAC CTCCGGCAAA GTCACAGTAT TTGGTTACGA TCTCGATTCT CAACTGGAAC TTGCCAAACA GAAGCTTGGT TTAGTACCGC AAGAATTTAA CTTCAACCCG TTTGAAACGG TCGAGCAGAT TGTTTTGCAG CAAGCCGGTT ACTATGGCGT ACCGAAAGCG TTAGCCAAAG AGCGCGCGAA AAAGTACCTG ACTCAGCTCG ATTTGTGGGA AAAACGCAGC GAACGAGCAA GAAACCTCTC TGGCGGCATG AAGCGCCGTT TGATGATTGC GCGTGCATTA ATGCATGAGC CGCAACTGCT GATTCTTGAT GAGCCAACCG CTGGCGTTGA TATCGAACTG CGCCGTTCCA TGTGGGAGTT TCTCAAGCAA ATCAACGCGC AAGGTGTGAC GATCATTCTC ACCACTCACT ATCTCGAAGA AGCGGAAATG CTCTGTCGCC ATATTGGCAT CATTCAACGC GGCGAGCTGA TTGAAAACAC CACCATGAAA TCTCTGCTTG ATAAGTTGCA CGTTGAGACG TTTGTTCTCG ATGTGGATGG CAACGCACCC ATTGCACCGC TGCAAGGAGT GGTTAAACAG CAGATGGTGG AAGGCTCGCT GGAGATTGAA TTAGAAAAAA GCCAAGGGAT CAACCATGTG TTTACCCAAC TTACCGAACA AGGGGTGAAA GTGCTGTCGA TGCGCAACAA AGTGAACCGT TTGGAAGAGC TGTTTGTCAG CATAGTCAAC AGTGGTAAGC GAGGTTAA
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Protein sequence | MYALEIEQLR KTYAGGFEAL KGISLQVKKG DFYALLGPNG AGKSTTIGII SSLVNKTSGK VTVFGYDLDS QLELAKQKLG LVPQEFNFNP FETVEQIVLQ QAGYYGVPKA LAKERAKKYL TQLDLWEKRS ERARNLSGGM KRRLMIARAL MHEPQLLILD EPTAGVDIEL RRSMWEFLKQ INAQGVTIIL TTHYLEEAEM LCRHIGIIQR GELIENTTMK SLLDKLHVET FVLDVDGNAP IAPLQGVVKQ QMVEGSLEIE LEKSQGINHV FTQLTEQGVK VLSMRNKVNR LEELFVSIVN SGKRG
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