| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0113 |
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| Symbol | |
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| ID | 5137861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 100396 |
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| End bp | 102357 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531573 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001216078 |
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| Protein GI | 147674614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGTGATG TCACCCAGAT TACCAATCGG GGTTGGGACA ATATAAAGAA TTGGAGCACC
ATTTGGCACG GTTTTATTAT CTGTCATTTG TTTACCATCA CATCAACGAT TAATATAGAG
ACAATTTTAC ACGGACTAAC GAAAGAACTC ATGGCTATGA ACCACCATCA GCGACGCAGT
GTACCACGCT TACTCACTCC GATTGCATTA TCAATCGTTT TATCGGCCTG TTCGACTCAA
CCTTCGTCAC CGGATGTGGT CGATATTACC GCTCAACCAC TCTTAACGGC GCAGACGTAT
TTGATGCGAG CCGATGCCAG CCAAGGTAAT CAGCAAAATG ATTGGCTGAT CATGGCTCTC
AAAGCCGCCA TAGAGGAAAA CAATCCCGAT CAAGCCCAAC TTCTGATCAT GCGCTTGGCG
AAACAGCCCT TGACTCCAAC TCAGCAGGCG CAGTGGCAAC TGCTGCGCGC TCAGTTATTA
GCTAATACCG AACAATATCA AGAAGCTCTA GAGCAACTGA GTTTCCAAGC CAATTGGTCG
TTACCTCAAG TTCAATGGCA GCAATATCAC CAGCTTCGTG CGGACATATT CACGGCTCTG
GATCGCTCTT TTGACTCCAC TCGTGAGTTA GTGGCGCTGT ACGGCCTTTC ATCCAACAAG
GACAAAGAAG CATTAGCGGA TCAAATCTGG GCAAACCTCA ATCACTACTC CGCCAGCAAA
ATTATCAAGC TTTCTACTGA GCCCGATGAA GCGCAGTTGG ATGGCTGGCT ACAGCTTGCG
ATCTATATGA AAACGCTGGG TAGCGATCTA CCACAACTGA AAAATACCTT AGAAAAATGG
CTGGCTGAAA ATCCGCAGCA CCCAGCGGCA ATTTATACCC CTAAAGCCAT TACCGATATT
TTGGCTTTAG AAATCGTCAA GCCGACTAAC ACCGCTTTAC TGTTACCCTT GACTGGTAAA
TTTGCTAAGC AGGCCCAATT TATTCGTGAT GGATTTGTGT TTGCCATGAT GAACGATGCC
GATCGCCAAA CAAACGCGAC GTTGACAATC ATCGATACCA ATGCCGAAAC GCTCGAATCT
GTTGATGCGA TTCTGACCAG CAAACAAATT GATTTTGTTG TGGGTCCACT GATCAAAGGT
AATATCGAAA AACTGCAGCA ATTCCAACAA AGCCGTGGCC AAATGATCCC AACGTTGGCG
CTGAACATCC CGGATCAAAT TGATACGACG GCGGGCGCTT GCTATCTCGC TCTATCACCT
GAACAAGAAG TCGCACAAGC GGCGAAACAT CTGTTCACTC AAGGCTACCG TTACCCACTG
ATCCTCGCGC CCCAAAACGC TTATGGTGAA CGTGTGGTTG AAGCCTTTAA TGAAGAGTGG
CGTCGTTACA GCAAAAACAA AGTGGCAGTG AATCTTTTTG GCGACAAGCG TCAATTACAA
CGCAATATCA ACTCCATTTT TGGCTTACAG GATAGCCAAC AAAACATCGC GCAGATGGAA
TCTCTGCTTG GTATGGGCTT AGAGAGCCAA CCTCGTAGCC GCCGTGATAT CGATGCTGTG
TATATTGTCG CAAACAGCTC AGAACTCACC TTGATCAAGC CATTTATTGA AGTGGCTATC
AACCCTGATA CCCGTCCACC AAAACTGTTC TCGAACTCGA ACAGCAACAC AGGTGGTCGC
CAATACGAAG ATTTGTCAGG CGTGACTTAC AGTGATATTC CACTGCTGAT ACAGCCAGCG
CCAAGTATCA AAGAGCAGCT AACCCAAATC TGGCCCGAAA GCTCAAATGC AGAGCGCCGC
TTGCAAGCTC TGGGGATGGA TGCCTACCGT TTGATGGTGG AACTTCCACA GATGAAAATC
GTCGAAGGCT ATACGATTGA TGGACAAACG GGTGTGCTAA GTATTGATGA ACAATGTGTG
GTTCAGCGTG AAATCAGCTG GGCAGAGCAT GGTGTTCGTT AA
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| Protein sequence | MCDVTQITNR GWDNIKNWST IWHGFIICHL FTITSTINIE TILHGLTKEL MAMNHHQRRS
VPRLLTPIAL SIVLSACSTQ PSSPDVVDIT AQPLLTAQTY LMRADASQGN QQNDWLIMAL
KAAIEENNPD QAQLLIMRLA KQPLTPTQQA QWQLLRAQLL ANTEQYQEAL EQLSFQANWS
LPQVQWQQYH QLRADIFTAL DRSFDSTREL VALYGLSSNK DKEALADQIW ANLNHYSASK
IIKLSTEPDE AQLDGWLQLA IYMKTLGSDL PQLKNTLEKW LAENPQHPAA IYTPKAITDI
LALEIVKPTN TALLLPLTGK FAKQAQFIRD GFVFAMMNDA DRQTNATLTI IDTNAETLES
VDAILTSKQI DFVVGPLIKG NIEKLQQFQQ SRGQMIPTLA LNIPDQIDTT AGACYLALSP
EQEVAQAAKH LFTQGYRYPL ILAPQNAYGE RVVEAFNEEW RRYSKNKVAV NLFGDKRQLQ
RNINSIFGLQ DSQQNIAQME SLLGMGLESQ PRSRRDIDAV YIVANSSELT LIKPFIEVAI
NPDTRPPKLF SNSNSNTGGR QYEDLSGVTY SDIPLLIQPA PSIKEQLTQI WPESSNAERR
LQALGMDAYR LMVELPQMKI VEGYTIDGQT GVLSIDEQCV VQREISWAEH GVR
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